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(-) Description

Title :  CALCICLUDINE (CAC) FROM GREEN MAMBA DENDROASPIS ANGUSTICEPS, NMR, 15 STRUCTURES
 
Authors :  B. Gilquin, A. Lecoq, F. Desne, M. Guenneugues, S. Zinn-Justin, A. Menez
Date :  26 May 98  (Deposition) - 13 Jan 99  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (15x)
Keywords :  Calcium Channel Blocker (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Gilquin, A. Lecoq, F. Desne, M. Guenneugues, S. Zinn-Justin, A. Menez
Conformational And Functional Variability Supported By The Bpti Fold: Solution Structure Of The Ca2+ Channel Blocker Calcicludine.
Proteins V. 34 520 1999 (for further references see the PDB file header)

(-) Compounds

Molecule 1 - CALCICLUDINE
    Chains: A
    Engineered: YES
    Organism Common: EASTERN GREEN MAMBA
    Organism Scientific: DENDROASPIS ANGUSTICEPS
    Organism Taxid: 8618

 Structural Features

(-) Chains, Units

  
NMR Structure (15x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1BF0)

(-) Sites  (0, 0)

(no "Site" information available for 1BF0)

(-) SS Bonds  (3, 3)

NMR Structure
No.Residues
1A:7 -A:57
2A:16 -A:40
3A:32 -A:53

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1BF0)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1BF0)

(-) PROSITE Motifs  (2, 2)

NMR Structure (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BPTI_KUNITZ_2PS50279 Pancreatic trypsin inhibitor (Kunitz) family profile.VKTHC_DENAN7-57  1A:7-57
2BPTI_KUNITZ_1PS00280 Pancreatic trypsin inhibitor (Kunitz) family signature.VKTHC_DENAN35-53  1A:35-53

(-) Exons   (0, 0)

(no "Exon" information available for 1BF0)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:60
 aligned with VKTHC_DENAN | P81658 from UniProtKB/Swiss-Prot  Length:60

    Alignment length:60
                                    10        20        30        40        50        60
           VKTHC_DENAN    1 WQPPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLGK 60
               SCOP domains d1bf0a_ A: Calcicludine (cac)                                SCOP domains
               CATH domains 1bf0A00 A:1-60 Factor Xa Inhibitor                           CATH domains
               Pfam domains ------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhh...........eeeeeee....eeeeeee............hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ------BPTI_KUNITZ_2  PDB: A:7-57 UniProt: 7-57           --- PROSITE (1)
                PROSITE (2) ----------------------------------BPTI_KUNITZ_1      ------- PROSITE (2)
                 Transcript ------------------------------------------------------------ Transcript
                  1bf0 A  1 WQPPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLGK 60
                                    10        20        30        40        50        60

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure

(-) CATH Domains  (1, 1)

NMR Structure

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1BF0)

(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)
Chain A   (VKTHC_DENAN | P81658)
molecular function
    GO:0004867    serine-type endopeptidase inhibitor activity    Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
biological process
    GO:0010951    negative regulation of endopeptidase activity    Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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