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(-) Description

Title :  STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM
 
Authors :  T. Neuefeind, R. Huber, P. Reinemer, J. Knaeblein
Date :  13 Oct 97  (Deposition) - 28 Oct 98  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (6x)
Keywords :  Transferase, Herbicide Detoxification (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Neuefeind, R. Huber, P. Reinemer, J. Knablein, L. Prade, K. Mann, B. Bieseler
Cloning, Sequencing, Crystallization And X-Ray Structure Of Glutathione S-Transferase-Iii From Zea Mays Var. Mutin: A Leading Enzyme In Detoxification Of Maize Herbicides.
J. Mol. Biol. V. 274 577 1997
PubMed-ID: 9417936  |  Reference-DOI: 10.1006/JMBI.1997.1401
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLUTATHIONE S-TRANSFERASE III
    Cell Line: 293
    Chains: A
    EC Number: 2.5.1.18
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET3A
    Expression System Strain: 293
    Expression System Taxid: 562
    Organism Scientific: ZEA MAYS
    Organism Taxid: 4577
    Other Details: APO FORM
    Variant: MUTIN

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (6x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric Unit (1, 5)
No.NameCountTypeFull Name
1CD5Ligand/IonCADMIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:150 , HOH A:276 , HOH A:331 , HOH A:385BINDING SITE FOR RESIDUE CD A 219
2AC2SOFTWAREHIS A:190BINDING SITE FOR RESIDUE CD A 220
3AC3SOFTWAREASP A:134 , GLU A:138 , HOH A:332BINDING SITE FOR RESIDUE CD A 222
4AC4SOFTWAREGLN A:54 , GLU A:67 , HIS A:106BINDING SITE FOR RESIDUE CD A 226
5AC5SOFTWAREASP A:28BINDING SITE FOR RESIDUE CD A 376

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1AW9)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Ile A:55 -Pro A:56

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1AW9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1AW9)

(-) Exons   (0, 0)

(no "Exon" information available for 1AW9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:216
 aligned with Q9ZP62_MAIZE | Q9ZP62 from UniProtKB/TrEMBL  Length:221

    Alignment length:216
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211      
         Q9ZP62_MAIZE     2 APLKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLTLNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFYPNASPLVFQLLVRPLLGGAPDAAVVDKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHASYLLYLSKTPKAGLVAARPHVKAWWEAIVARPAFQKTVAAIPLPPPP 217
               SCOP domains d1aw9a2 A:2-82 Class phi GST                                                     d1aw9a1 A:83-217 Class phi GST                                                                                                          SCOP domains
               CATH domains -1aw9A01 A:3-87 Glutaredoxin                                                          1aw9A02 A:88-208  [code=1.20.1050.10, no name defined]                                                                   --------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeee.....hhhhhhhhhhhh....eeee.............hhh........eeee..eeee.hhhhhhhhhhh..............hhhhhhhhhhhhh..hhhhhhhhhhh.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhh...hhhhh..hhhhhhhhhhhh.hhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1aw9 A   2 APLKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFYPNASPLVFQLLVRPLLGGAPDAAVVDKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHASYLLYLSKTPKAGLVAARPHVKAWWEAIVARPAFQKTVAAIPLPPPP 217
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 2)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1AW9)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A   (Q9ZP62_MAIZE | Q9ZP62)
molecular function
    GO:0004364    glutathione transferase activity    Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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 Related Entries

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