Chain A from PDB Type:PROTEIN Length:163
aligned with COAT_TYMV | P03608 from UniProtKB/Swiss-Prot Length:189
Alignment length:163
36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186
COAT_TYMV 27 SPLTIKQPFQSEVLFAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVGVCWVPANSPVTPAQITKTYGGQIFCIGGAINTLSPLIVKCPLEMMNPRVKDSIQYLDSPKLLISITAQPTAPPASTCIITVSGTLSMHSPLITDTST 189
SCOP domains d1auya_ A: Tymovirus coat protein SCOP domains
CATH domains 1auyA00 A:27-189 [code=2.60.120.20, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeeeeeeee....eeeeeehhh.hhhhhhhhh..eeeeeeeeeeeee.hhhhh..eeeeeeeee......hhhhhh....eeeee..........eee..hhh..............eeeeeeee..........eeeeeeeeeeee......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1auy A 27 SPLTIKQPFQSEVLFAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVGVCWVPAQSPVTPAQITKTYGGQIFCIGGAIQTLSPLIVKCPLEMMQPRVKDSIQYLDSPKLLISITAQPTAPPASTCIITVSGTLSMHSPLITDTST 189
36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186
Chain B from PDB Type:PROTEIN Length:189
aligned with COAT_TYMV | P03608 from UniProtKB/Swiss-Prot Length:189
Alignment length:189
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
COAT_TYMV 1 MEIDKELAPQDRTVTVATVLPAVPGPSPLTIKQPFQSEVLFAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVGVCWVPANSPVTPAQITKTYGGQIFCIGGAINTLSPLIVKCPLEMMNPRVKDSIQYLDSPKLLISITAQPTAPPASTCIITVSGTLSMHSPLITDTST 189
SCOP domains d1auyb_ B: Tymovirus coat protein SCOP domains
CATH domains 1auyB00 B:1-189 [code=2.60.120.20, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............................eeeeeeeeeeeee....eeeeeehhh.hhhhhhhhh..eeeeeeeeeeeee........eeeeeeeee......hhhhhh....eeeee.........eeee...................eeeeeeee..........eeeeeeeeeeee......... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1auy B 1 MEIDKELAPQDRTVTVATVLPAVPGPSPLTIKQPFQSEVLFAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVGVCWVPAQSPVTPAQITKTYGGQIFCIGGAIQTLSPLIVKCPLEMMQPRVKDSIQYLDSPKLLISITAQPTAPPASTCIITVSGTLSMHSPLITDTST 189
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
Chain C from PDB Type:PROTEIN Length:189
aligned with COAT_TYMV | P03608 from UniProtKB/Swiss-Prot Length:189
Alignment length:189
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
COAT_TYMV 1 MEIDKELAPQDRTVTVATVLPAVPGPSPLTIKQPFQSEVLFAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVGVCWVPANSPVTPAQITKTYGGQIFCIGGAINTLSPLIVKCPLEMMNPRVKDSIQYLDSPKLLISITAQPTAPPASTCIITVSGTLSMHSPLITDTST 189
SCOP domains d1auyc_ C: Tymovirus coat protein SCOP domains
CATH domains 1auyC00 C:1-189 [code=2.60.120.20, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............................eeeeeeeeeee......eeeeeehhh.hhhhhhh....eeeeeeeeeeeee........eeeeeeeee......hhhhhh....eeeee.........eeee..hhh..............eeeeeeee..........eeeeeeeeeeee......... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1auy C 1 MEIDKELAPQDRTVTVATVLPAVPGPSPLTIKQPFQSEVLFAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVGVCWVPAQSPVTPAQITKTYGGQIFCIGGAIQTLSPLIVKCPLEMMQPRVKDSIQYLDSPKLLISITAQPTAPPASTCIITVSGTLSMHSPLITDTST 189
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180
Legend: |
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→ Mismatch |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |