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(-) Description

Title :  HISTIDYL-TRNA SYNTHETASE IN COMPLEX WITH HISTIDYL-ADENYLATE
 
Authors :  S. Cusack, A. Aberg
Date :  19 Feb 97  (Deposition) - 20 Aug 97  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Histidyl-Adenylate, Amino Acid, Trna Synthetase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Aberg, A. Yaremchuk, M. Tukalo, B. Rasmussen, S. Cusack
Crystal Structure Analysis Of The Activation Of Histidine By Thermus Thermophilus Histidyl-Trna Synthetase.
Biochemistry V. 36 3084 1997
PubMed-ID: 9115984  |  Reference-DOI: 10.1021/BI9618373
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HISTIDYL-TRNA SYNTHETASE
    Chains: A, B, C, D
    EC Number: 6.1.1.21
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 274
    Other Details: HISTIDYL-ADENYLATE PRODUCED ENZYMATICALLY IN THE CRYSTAL IS PRESENT IN THE ACTIVE SITE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1HAM4Ligand/IonHISTIDYL-ADENOSINE MONOPHOSPHATE
2SO44Ligand/IonSULFATE ION
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1HAM2Ligand/IonHISTIDYL-ADENOSINE MONOPHOSPHATE
2SO42Ligand/IonSULFATE ION
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
1HAM2Ligand/IonHISTIDYL-ADENOSINE MONOPHOSPHATE
2SO42Ligand/IonSULFATE ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:18 , ARG A:22BINDING SITE FOR RESIDUE SO4 A 422
2AC2SOFTWAREARG D:18 , ARG D:22BINDING SITE FOR RESIDUE SO4 D 422
3AC3SOFTWAREARG C:18 , ARG C:22BINDING SITE FOR RESIDUE SO4 C 422
4AC4SOFTWAREARG B:18 , ARG B:22BINDING SITE FOR RESIDUE SO4 B 422
5AC5SOFTWAREGLU A:81 , THR A:83 , ARG A:112 , GLU A:114 , GLY A:119 , ARG A:120 , TYR A:121 , PHE A:124 , GLN A:126 , GLU A:130 , ARG A:259 , LEU A:261 , TYR A:263 , TYR A:264 , ALA A:281 , LEU A:282 , GLY A:283 , GLY A:284 , GLY A:285 , GLY A:286 , TYR A:288 , GLY A:304 , PHE A:305 , ALA A:306 , GLY A:308 , ARG A:311BINDING SITE FOR RESIDUE HAM A 423
6AC6SOFTWAREGLU B:81 , THR B:83 , ARG B:112 , GLU B:114 , GLY B:119 , ARG B:120 , TYR B:121 , PHE B:124 , GLN B:126 , ASN B:128 , GLU B:130 , ARG B:259 , LEU B:261 , TYR B:263 , TYR B:264 , ALA B:281 , LEU B:282 , GLY B:283 , GLY B:284 , TYR B:288 , GLY B:304 , PHE B:305 , ALA B:306 , GLY B:308 , ARG B:311BINDING SITE FOR RESIDUE HAM B 423
7AC7SOFTWAREGLU C:81 , THR C:83 , ARG C:112 , GLU C:114 , GLY C:119 , ARG C:120 , TYR C:121 , PHE C:124 , GLN C:126 , ASN C:128 , GLU C:130 , ARG C:259 , TYR C:263 , TYR C:264 , ALA C:281 , LEU C:282 , GLY C:283 , TYR C:288 , GLY C:304 , PHE C:305 , ALA C:306 , GLY C:308 , ARG C:311BINDING SITE FOR RESIDUE HAM C 423
8AC8SOFTWAREGLU D:81 , THR D:83 , ARG D:112 , GLU D:114 , GLY D:119 , TYR D:121 , PHE D:124 , GLN D:126 , ASN D:128 , GLU D:130 , ARG D:259 , LEU D:261 , TYR D:263 , TYR D:264 , ALA D:281 , LEU D:282 , GLY D:283 , GLY D:284 , TYR D:288 , GLY D:304 , PHE D:305 , ALA D:306 , GLY D:308 , ARG D:311BINDING SITE FOR RESIDUE HAM D 423

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1ADY)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Gln A:100 -Pro A:101
2Arg A:352 -Pro A:353
3Gln B:100 -Pro B:101
4Arg B:352 -Pro B:353
5Gln C:100 -Pro C:101
6Arg C:352 -Pro C:353
7Gln D:100 -Pro D:101
8Arg D:352 -Pro D:353

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1ADY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1ADY)

(-) Exons   (0, 0)

(no "Exon" information available for 1ADY)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:420
 aligned with SYH_THET8 | P56194 from UniProtKB/Swiss-Prot  Length:421

    Alignment length:420
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421
            SYH_THET8     2 TARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLELNPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQALG 421
               SCOP domains d1adya2 A:2-325 Histidyl-tRNA synthetase (HisRS)                                                                                                                                                                                                                                                                                    d1adya1 A:326-421 Histidyl-tRNA synthetase (HisRS), C-terminal domain                            SCOP domains
               CATH domains 1adyA01 A:2-323 Bira Bifunctional Protein; Domain 2                                                                                                                                                                                                                                                                               1adyA02 A:324-419  [code=3.40.50.800, no name defined]                                          -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhh.........eeehhhhhhhh....hhhhh...eee.....eeee....hhhhhhhhhh..hhh....eeeeeeeeee...........eeeeeeeeee....hhhhhhhhhhhhhhhhh......eeeeee...hhhhhhhhhhhhhhhhhhhhh..hhhhhh....hhhh.....hhhhhhhhhh....hhhh..hhhhhhhhhhhhhhhh....eee.............eeeeee........eeeeeee...hhhh.......eeeeeeehhhhhhhhhh............eeeee..hhhhhhhhhhhhhh.....eee......hhhhhhhhhh....eeeee.hhhhhh.eeeeee.....eeeeehhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1ady A   2 TARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLEENPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQALG 421
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421


Chain B from PDB  Type:PROTEIN  Length:420
 aligned with SYH_THET8 | P56194 from UniProtKB/Swiss-Prot  Length:421

    Alignment length:420
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421
            SYH_THET8     2 TARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLELNPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQALG 421
               SCOP domains d1adyb2 B:2-325 Histidyl-tRNA synthetase (HisRS)                                                                                                                                                                                                                                                                                    d1adyb1 B:326-421 Histidyl-tRNA synthetase (HisRS), C-terminal domain                            SCOP domains
               CATH domains 1adyB01 B:2-325 Bira Bifunctional Protein; Domain 2                                                                                                                                                                                                                                                                                 1adyB02 B:326-419  [code=3.40.50.800, no name defined]                                        -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhh.........eeehhhhhhhh....hhhhh...eee.....eeee....hhhhhhhhhh..hhh....eeeeeeeeee...........eeeeeeeeee....hhhhhhhhhhhhhhhhh......eeeeee...hhhhhhhhhhhhhhhhhhhhh..hhhhhh....hhhh.....hhhhhhhhhh....hhhh..hhhhhhhhhhhhhhhh....eee.............eeeeee........eeeeeee...hhhh.......eeeeeeehhhhhhhhhh............eeeee..hhhhhhhhhhhhhh.....eee......hhhhhhhhhh....eeeee.hhhhhh.eeeeee.....eeeeehhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1ady B   2 TARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLEENPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQALG 421
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421


Chain C from PDB  Type:PROTEIN  Length:420
 aligned with SYH_THET8 | P56194 from UniProtKB/Swiss-Prot  Length:421

    Alignment length:420
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421
            SYH_THET8     2 TARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLELNPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQALG 421
               SCOP domains d1adyc2 C:2-325 Histidyl-tRNA synthetase (HisRS)                                                                                                                                                                                                                                                                                    d1adyc1 C:326-421 Histidyl-tRNA synthetase (HisRS), C-terminal domain                            SCOP domains
               CATH domains 1adyC01 C:2-325 Bira Bifunctional Protein; Domain 2                                                                                                                                                                                                                                                                                 1adyC02 C:326-419  [code=3.40.50.800, no name defined]                                        -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhh.........eeehhhhhhhh....hhhhh...eee.....eeee....hhhhhhhhhh..hhh....eeeeeeeeee...........eeeeeeeeee....hhhhhhhhhhhhhhhhh.....eeeeeee...hhhhhhhhhhhhhhhhhhhhh..hhhhhh....hhhh.....hhhhhhhhhh....hhhh..hhhhhhhhhhhhhhhh....eee.............eeeeeee.......eeeeeee...hhhh.......eeeeeeehhhhhhhhhh............eeeee..hhhhhhhhhhhhhh.....eee......hhhhhhhhhh....eeeee.hhhhhh.eeeeee.....eeeeehhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1ady C   2 TARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLEENPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQALG 421
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421


Chain D from PDB  Type:PROTEIN  Length:420
 aligned with SYH_THET8 | P56194 from UniProtKB/Swiss-Prot  Length:421

    Alignment length:420
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421
            SYH_THET8     2 TARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLELNPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQALG 421
               SCOP domains d1adyd2 D:2-325 Histidyl-tRNA synthetase (HisRS)                                                                                                                                                                                                                                                                                    d1adyd1 D:326-421 Histidyl-tRNA synthetase (HisRS), C-terminal domain                            SCOP domains
               CATH domains 1adyD01 D:2-325 Bira Bifunctional Protein; Domain 2                                                                                                                                                                                                                                                                                 1adyD02 D:326-419  [code=3.40.50.800, no name defined]                                        -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhh.........eeehhhhhhhh....hhhhh...eee.....eeee....hhhhhhhhhh..hhh....eeeeeeeeee...........eeeeeeeeee....hhhhhhhhhhhhhhhhh......eeeeee...hhhhhhhhhhhhhhhhhhhhh..hhhhhh....hhhh.....hhhhhhhhhh....hhhh..hhhhhhhhhhhhhhhh....eee.............eeeeee........eeeeeee...hhhh.......eeeeeeehhhhhhhhhh............eeeee..hhhhhhhhhhhhhh.....eee......hhhhhhhhhh....eeeee.hhhhhh.eeeeee....eeeeeehhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1ady D   2 TARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLEENPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQALG 421
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1ADY)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (SYH_THET8 | P56194)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0004812    aminoacyl-tRNA ligase activity    Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
    GO:0004821    histidine-tRNA ligase activity    Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His).
    GO:0016874    ligase activity    Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0006427    histidyl-tRNA aminoacylation    The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
    GO:0006418    tRNA aminoacylation for protein translation    The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  1ady
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  SYH_THET8 | P56194
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  6.1.1.21
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  SYH_THET8 | P56194
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 Related Entries

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UniProtKB/Swiss-Prot
        SYH_THET8 | P56194: 1adj 1h4v

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1ADY)