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(-) Description

Title :  GAMMAF CRYSTALLIN FROM BOVINE LENS
 
Authors :  B. V. Norledge, R. Hay, O. A. Bateman, C. Slingsby, H. E. White, D. S. Moss, P. F. Lindley, H. P. C. Driessen
Date :  10 Feb 98  (Deposition) - 17 Jun 98  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Eye Lens Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. V. Norledge, R. E. Hay, O. A. Bateman, C. Slingsby, H. P. Driessen
Towards A Molecular Understanding Of Phase Separation In The Lens: A Comparison Of The X-Ray Structures Of Two High Tc Gamma-Crystallins, Gammae And Gammaf, With Two Low Tc Gamma-Crystallins, Gammab And Gammad.
Exp. Eye Res. V. 65 609 1997
PubMed-ID: 9367641  |  Reference-DOI: 10.1006/EXER.1997.0368
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GAMMAF CRYSTALLIN
    Chains: A
    Organ: LENS
    Organism Common: CATTLE
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1A45)

(-) Sites  (0, 0)

(no "Site" information available for 1A45)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1A45)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1A45)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1A45)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CRYSTALLIN_BETA_GAMMAPS50915 Crystallins beta and gamma 'Greek key' motif profile.CRGF_BOVIN2-40
41-83
88-128
129-171		  4A:1-39
A:40-82
A:88-128
A:129-171
Biological Unit 1 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CRYSTALLIN_BETA_GAMMAPS50915 Crystallins beta and gamma 'Greek key' motif profile.CRGF_BOVIN2-40
41-83
88-128
129-171		  8A:1-39
A:40-82
A:88-128
A:129-171

(-) Exons   (0, 0)

(no "Exon" information available for 1A45)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:173
 aligned with CRGF_BOVIN | P23005 from UniProtKB/Swiss-Prot  Length:174

    Alignment length:173
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171   
           CRGF_BOVIN     2 GKITFYEDRGFQGRHYECSSDHSNLQPYFSRCNSIRVDSGCWMLYEQPNFQGPQYFLRRGDYPDYQQWMGLNDSIRSCRLIPHTGSHRLRIYEREDYRGQMVEITEDCSSLHDRFHFSEIHSFNVLEGWWVLYEMTNYRGRQYLLRPGDYRRYHDWGATNARVGSLRRAVDFY 174
               SCOP domains d1a45a1 A:1-84 gamma-Crystallin                                                     d1a45a2 A:86-174 gamma-Crystallin                                                         SCOP domains
               CATH domains 1a45A01 A:1-83 Crystallins                                                         1a45A02 A:84-174 Crystallins                                                               CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........eeee...............eeeeee.eeeee........eeee..eee..............eeeee......eeeee..hhh...eeee.................eeeeee..eeee........eeee..eee..hhhh........eeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE CRYSTALLIN_BETA_GAMMA  PDB: A:1-39     CRYSTALLIN_BETA_GAMMA  PDB: A:40-82        ----CRYSTALLIN_BETA_GAMMA  PDB: A:88-128     CRYSTALLIN_BETA_GAMMA  PDB: A:129-171      --- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1a45 A   1 GKITFYEDRGFQGRHYECSSDHSNLQPYFSRCNSIRVDSGCWMLYEQPNFQGPQYFLRRGDYPDYQQWMGLNDSIRSCRLIPHTGSHRLRIYEREDYRGQMVEITEDCSSLHDRFHFSEIHSFNVLEGWWVLYEMTNYRGRQYLLRPGDYRRYHDWGATNARVGSLRRAVDFY 174
                                    10        20        30        40        50        60        70        80   ||   91       101       111       121       131       141       151       161       171   
                                                                                                              84|                                                                                        
                                                                                                               86
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 2)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1A45)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A   (CRGF_BOVIN | P23005)
molecular function
    GO:0005212    structural constituent of eye lens    The action of a molecule that contributes to the structural integrity of the lens of an eye.

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  1a45
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 Related Entries

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        CRGF_BOVIN | P23005: 1m8u

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