Chain A from PDB Type:PROTEIN Length:69
aligned with Q76RJ0_HHV8 | Q76RJ0 from UniProtKB/TrEMBL Length:95
Alignment length:69
95
38 48 58 68 78 88 |
Q76RJ0_HHV8 29 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIA-- -
SCOP domains d1zxta_ A: automated matches SCOP domains
CATH domains -----1zxtA01 A:10-70 [code=2.40.50.40, no name defined] --- CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zxt A 5 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIAHH 73
14 24 34 44 54 64
Chain A from PDB Type:PROTEIN Length:69
aligned with Q98158_HHV8 | Q98158 from UniProtKB/TrEMBL Length:95
Alignment length:69
95
38 48 58 68 78 88 |
Q98158_HHV8 29 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIA-- -
SCOP domains d1zxta_ A: automated matches SCOP domains
CATH domains -----1zxtA01 A:10-70 [code=2.40.50.40, no name defined] --- CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zxt A 5 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIAHH 73
14 24 34 44 54 64
Chain B from PDB Type:PROTEIN Length:69
aligned with Q76RJ0_HHV8 | Q76RJ0 from UniProtKB/TrEMBL Length:95
Alignment length:69
95
38 48 58 68 78 88 |
Q76RJ0_HHV8 29 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIA-- -
SCOP domains d1zxtb_ B: automated matches SCOP domains
CATH domains -----1zxtB01 B:10-70 [code=2.40.50.40, no name defined] --- CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zxt B 5 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIAHH 73
14 24 34 44 54 64
Chain B from PDB Type:PROTEIN Length:69
aligned with Q98158_HHV8 | Q98158 from UniProtKB/TrEMBL Length:95
Alignment length:69
95
38 48 58 68 78 88 |
Q98158_HHV8 29 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIA-- -
SCOP domains d1zxtb_ B: automated matches SCOP domains
CATH domains -----1zxtB01 B:10-70 [code=2.40.50.40, no name defined] --- CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zxt B 5 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIAHH 73
14 24 34 44 54 64
Chain C from PDB Type:PROTEIN Length:69
aligned with Q76RJ0_HHV8 | Q76RJ0 from UniProtKB/TrEMBL Length:95
Alignment length:69
95
38 48 58 68 78 88 |
Q76RJ0_HHV8 29 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIA-- -
SCOP domains d1zxtc_ C: automated matches SCOP domains
CATH domains -----1zxtC01 C:10-70 [code=2.40.50.40, no name defined] --- CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zxt C 5 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIAHH 73
14 24 34 44 54 64
Chain C from PDB Type:PROTEIN Length:69
aligned with Q98158_HHV8 | Q98158 from UniProtKB/TrEMBL Length:95
Alignment length:69
95
38 48 58 68 78 88 |
Q98158_HHV8 29 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIA-- -
SCOP domains d1zxtc_ C: automated matches SCOP domains
CATH domains -----1zxtC01 C:10-70 [code=2.40.50.40, no name defined] --- CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zxt C 5 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIAHH 73
14 24 34 44 54 64
Chain D from PDB Type:PROTEIN Length:69
aligned with Q76RJ0_HHV8 | Q76RJ0 from UniProtKB/TrEMBL Length:95
Alignment length:69
95
38 48 58 68 78 88 |
Q76RJ0_HHV8 29 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIA-- -
SCOP domains d1zxtd_ D: automated matches SCOP domains
CATH domains -----1zxtD01 D:10-70 [code=2.40.50.40, no name defined] --- CATH domains
Pfam domains (1) IL8-1zxtD01 D:5-67 ------ Pfam domains (1)
Pfam domains (2) IL8-1zxtD02 D:5-67 ------ Pfam domains (2)
Pfam domains (3) IL8-1zxtD03 D:5-67 ------ Pfam domains (3)
Pfam domains (4) IL8-1zxtD04 D:5-67 ------ Pfam domains (4)
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zxt D 5 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIAHH 73
14 24 34 44 54 64
Chain D from PDB Type:PROTEIN Length:69
aligned with Q98158_HHV8 | Q98158 from UniProtKB/TrEMBL Length:95
Alignment length:69
95
38 48 58 68 78 88 |
Q98158_HHV8 29 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIA-- -
SCOP domains d1zxtd_ D: automated matches SCOP domains
CATH domains -----1zxtD01 D:10-70 [code=2.40.50.40, no name defined] --- CATH domains
Pfam domains (1) IL8-1zxtD01 D:5-67 ------ Pfam domains (1)
Pfam domains (2) IL8-1zxtD02 D:5-67 ------ Pfam domains (2)
Pfam domains (3) IL8-1zxtD03 D:5-67 ------ Pfam domains (3)
Pfam domains (4) IL8-1zxtD04 D:5-67 ------ Pfam domains (4)
Sec.struct. author .....eee.........hhh.eeeeee.........eeeee....eeee...hhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
1zxt D 5 VSYTPNSCCYGFQQHPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRLPAIAHH 73
14 24 34 44 54 64
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |