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(-) Description

Title :  NMR STRUCTURE OF ANTIZYME ISOFORM 1 FROM RAT
 
Authors :  D. W. Hoffman, M. L. Hackert
Date :  12 May 05  (Deposition) - 19 Jul 05  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (12x)
Keywords :  Antizyme, Ornithine Decarboxylase Inhibitor, Lyase Inhibitor (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  D. W. Hoffman, M. L. Hackert
Nmr Structure Of Antizyme Isoform 1 From Rat
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ORNITHINE DECARBOXYLASE ANTIZYME
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism CommonNORWAY RAT
    Organism ScientificRATTUS NORVEGICUS
    Organism Taxid10116
    SynonymODC-AZ

 Structural Features

(-) Chains, Units

  
NMR Structure (12x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ODC_AZPS01337 Ornithine decarboxylase antizyme signature.OAZ1_RAT159-167  1A:159-167

(-) Exons   (0, 0)

(no "Exon" information available for 1ZO0)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:126
 aligned with OAZ1_RAT | P54370 from UniProtKB/Swiss-Prot  Length:227

    Alignment length:126
                                   103       113       123       133       143       153       163       173       183       193       203       213      
             OAZ1_RAT    94 ILYSDERLNVTEEPTSNDKTRVLSIQCTLTEAKQVTWRAVWNGGGLYIELPAGPLPEGSKDSFAALLEFAEEQLRADHVFICFPKNREDRAALLRTFSFLGFEIVRPGHPLVPKRPDACFMVYTLE 219
               SCOP domains d1zo0a1 A:94-219 Ornithine decarboxylase antizyme                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains -------------------ODC_AZ-1zo0A01 A:113-218                                                                                  - Pfam domains
         Sec.struct. author .eee...eeeeee.......eeeeeee.......eeeeeeee..eeeee..........hhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhh....eee.............eeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------ODC_AZ   ---------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1zo0 A  94 ILYSDERLNVTEEPTSNDKTRVLSIQCTLTEAKQVTWRAVWNGGGLYIELPAGPLPEGSKDSFAALLEFAEEQLRADHVFICFPKNREDRAALLRTFSFLGFEIVRPGHPLVPKRPDACFMVYTLE 219
                                   103       113       123       133       143       153       163       173       183       193       203       213      

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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (1, 1)

NMR Structure

(-) Gene Ontology  (10, 10)

NMR Structure(hide GO term definitions)
Chain A   (OAZ1_RAT | P54370)
molecular function
    GO:0019899    enzyme binding    Interacting selectively and non-covalently with any enzyme.
    GO:0008073    ornithine decarboxylase inhibitor activity    The stopping, prevention or reduction of the activity of the enzyme ornithine decarboxylase.
    GO:0046982    protein heterodimerization activity    Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
biological process
    GO:0043086    negative regulation of catalytic activity    Any process that stops or reduces the activity of an enzyme.
    GO:0006596    polyamine biosynthetic process    The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.
    GO:0006595    polyamine metabolic process    The chemical reactions and pathways involving polyamines, any organic compound containing two or more amino groups.
    GO:0090316    positive regulation of intracellular protein transport    Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells.
    GO:0045732    positive regulation of protein catabolic process    Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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