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(-) Description

Title :  STRUCTURE OF CONSERVED PROTEIN PA5202 FROM PSEUDOMONAS AERUGINOSA
 
Authors :  M. E. Cuff, E. Evdokimova, A. Edwards, A. Savchenko, A. Joachimiak, Mid Center For Structural Genomics (Mcsg)
Date :  02 May 05  (Deposition) - 14 Jun 05  (Release) - 16 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Pseudomonas Aeruginosa, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. F. Gonzalez, A. Tchigvintsev, G. Brown, R. Flick, E. Evdokimova, X. Xu, J. Osipiuk, M. E. Cuff, S. Lynch, A. Joachimiak, A. Savchenko, A. F. Yakunin
Structure And Activity Of The Pseudomonas Aeruginosa Hotdog-Fold Thioesterases Pa5202 And Pa2801.
Biochem. J. V. 444 445 2012
PubMed-ID: 22439787  |  Reference-DOI: 10.1042/BJ20112032

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN PA5202
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: P11
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: PA5202
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 208964
    Strain: PAO1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric/Biological Unit (2, 12)
No.NameCountTypeFull Name
1ACY1Ligand/IonACETIC ACID
2MSE11Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG B:7 , MSE B:10 , VAL B:23BINDING SITE FOR RESIDUE ACY B 804

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1ZKI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1ZKI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1ZKI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1ZKI)

(-) Exons   (0, 0)

(no "Exon" information available for 1ZKI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:126
 aligned with Q9HTY7_PSEAE | Q9HTY7 from UniProtKB/TrEMBL  Length:129

    Alignment length:126
                                    13        23        33        43        53        63        73        83        93       103       113       123      
         Q9HTY7_PSEAE     4 MPAREQMISAYSELVGLDPVSLGDGVAEVRLPMAAHLRNRGGVMHGGALFSLMDVTMGLACSSSHGFDRQSVTLECKINYIRAVADGEVRCVARVLHAGRRSLVVEAEVRQGDKLVAKGQGTFAQL 129
               SCOP domains d1zkia1 A:4-129 Hypothetical protein PA5202                                                                                    SCOP domains
               CATH domains -1zkiA00 A:5-129  [code=3.10.129.10, no name defined]                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhh.hhhhhhhh.eeeee...eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh....eeeeeeeeee.......eeeeeeeeeee...eeeeeeeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1zki A   4 mPAREQmISAYSELVGLDPVSLGDGVAEVRLPmAAHLRNRGGVmHGGALFSLmDVTmGLACSSSHGFDRQSVTLECKINYIRAVADGEVRCVARVLHAGRRSLVVEAEVRQGDKLVAKGQGTFAQL 129
                            |     | 13        23        33  |     43   |    53  |   | 63        73        83        93       103       113       123      
                            |     |                        36-MSE     47-MSE   56-MSE                                                                     
                            4-MSE |                                                60-MSE                                                                 
                                 10-MSE                                                                                                                   


Chain B from PDB  Type:PROTEIN  Length:125
 aligned with Q9HTY7_PSEAE | Q9HTY7 from UniProtKB/TrEMBL  Length:129

    Alignment length:125
                                    14        24        34        44        54        64        74        84        94       104       114       124     
         Q9HTY7_PSEAE     5 PAREQMISAYSELVGLDPVSLGDGVAEVRLPMAAHLRNRGGVMHGGALFSLMDVTMGLACSSSHGFDRQSVTLECKINYIRAVADGEVRCVARVLHAGRRSLVVEAEVRQGDKLVAKGQGTFAQL 129
               SCOP domains d1zkib_ B: Hypothetical protein PA5202                                                                                        SCOP domains
               CATH domains 1zkiB00 B:5-129  [code=3.10.129.10, no name defined]                                                                          CATH domains
           Pfam domains (1) ---------------------------------------4HBT-1zkiB01 B:44-121                                                         -------- Pfam domains (1)
           Pfam domains (2) ---------------------------------------4HBT-1zkiB02 B:44-121                                                         -------- Pfam domains (2)
         Sec.struct. author .hhhhhhhhhhhhhh.eeeeee..eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh....eeeeeeeeee.......eeeeeeeeeee...eeeeeeeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1zki B   5 PAREQmISAYSELVGLDPVSLGDGVAEVRLPmAAHLRNRGGVmHGGALFSLmDVTmGLACSSSHGFDRQSVTLECKINYIRAVADGEVRCVARVLHAGRRSLVVEAEVRQGDKLVAKGQGTFAQL 129
                                 |  14        24        34 |      44  |     54 |   |  64        74        84        94       104       114       124     
                                10-MSE                    36-MSE     47-MSE   56-MSE                                                                     
                                                                                  60-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Clan: HotDog (52)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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