Chain A from PDB Type:PROTEIN Length:527
aligned with PCKA_ACTSZ | A6VKV4 from UniProtKB/Swiss-Prot Length:538
Alignment length:535
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512 522 532
PCKA_ACTSZ 3 DLNKLVKELNDLGLTDVKEIVYNPSYEQLFEEETKPGLEGFDKGTLTTLGAVAVDTGIFTGRSPKDKYIVCDETTKDTVWWNSEAAKNDNKPMTQETWKSLRELVAKQLSGKRLFVVEGYCGASEKHRIGVRMVTEVAWQAHFVKNMFIRPTDEELKNFKADFTVLNGAKCTNPNWKEQGLNSENFVAFNITEGIQLIGGTWYGGEMKKGMFSMMNYFLPLKGVASMHCSANVGKDGDVAIFFGLSGTGKTTLSTDPKRQLIGDDEHGWDESGVFNFEGGCYAKTINLSQENEPDIYGAIRRDALLENVVVRADGSVDFDDGSKTENTRVSYPIYHIDNIVRPVSKAGHATKVIFLTADAFGVLPPVSKLTPEQTEYYFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPIQYADVLVERMKASGAEAYLVNTGWNGTGKRISIKDTRGIIDAILDGSIEKAEMGELPIFNLAIPKALPGVDPAILDPRDTYADKAQWQVKAEDLANRFVKNFVKYTANPEAAKLVGAGPK 537
SCOP domains d1ygga1 A:4-227 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) d1ygga2 A:228-539 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) SCOP domains
CATH domains 1yggA01 A:4-42,A:67-227 1yggA02 ---1yggA01 A:4-42,A:67-227 Phosphoenolpyruvate Carboxykinase, domain 1 1yggA03 A:228-283,A:344-539 1yggA02 A:43-63,A:284-341 --1yggA03 A:228-283,A:344-539 [code=3.90.228.20, no name defined] CATH domains
Pfam domains ---------------PEPCK_ATP-1yggA01 A:19-493 ---------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhh......ee...hhhhhhhhhh..........ee.....eee........hhh.eeee....................eeehhhhhhhhhhhhh.......eeeeeeee.......eeeeeee.hhhhhhhhhhhh..............eeeeee......hhhhhh.....eeeee....eeeee....hhhhhhhhhhhhhhhhhhh..eeee.eeee.....eeeee.....hhhhhh.....eeee..eeeee..eeee...eeeee........hhhhhhh.....eee..ee.....ee..........eeeee.hhh........ee..eeeeeeee.........eee.hhhhhhhhhhhheeee.--------..eeee.hhhhhhhh..hhhhhhhhhhhhhhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhh.eeee....eeee......hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEPCK_ATP ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ygg A 4 DLNKLVKELNDLGLTDVKEIVYNPSYEQLFEEETKPGLEGFDKGTLTTLGAVAVDTGIFTGRSPKDKYIVCDETTKDTVWWNSEAAKNDNKPMTQETWKSLRELVAKQLSGKRLFVVEGYCGASEKHRIGVRMVTEVAWQAHFVKNMFIRPTDEELKNFKADFTVLNGAKCTNPNWKEQGLNSENFVAFNITEGIQLIGGTWYGGEMKKGMFSMMNYFLPLKGVASMHCSANVGKDGDVAIFFGLSGTGKTTLSTDPKRQLIGDDEHGWDESGVFNFEGGCYAKTINLSQENEPDIYGAIRRDALLENVVVRADGSVDFDDGSKTENTRVSYPIYHIDNIVRPVSKAGHATKVIFLTADAFGVLPPVSKLTPEQTEYYFLSGFTAKL--------EPTPTFSACFGAAFLSLHPIQYADVLVERMKASGAEAYLVNTGWNGTGKRISIKDTRGIIDAILDGSIEKAEMGELPIFNLAIPKALPGVDPAILDPRDTYADKAQWQVKAEDLANRFVKNFVKYTANPEAAKLVGAGPK 539
13 23 33 43 53 63 73 83 || 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 | - | 404 414 424 434 444 454 464 474 484 494 504 514 524 534
88| 391 400
90
Chain A from PDB Type:PROTEIN Length:527
aligned with Q6W6X5_ACTSC | Q6W6X5 from UniProtKB/TrEMBL Length:538
Alignment length:535
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512 522 532
Q6W6X5_ACTSC 3 DLNKLVKELNDLGLTDVKEIVYNPSYEQLFEEETKPGLEGFDKGTLTTLGAVAVDTGIFTGRSPKDKYIVCDETTKDTVWWNSEAAKNDNKPMTQETWKSLRELVAKQLSGKRLFVVEGYCGASEKHRIGVRMVTEVAWQAHFVKNMFIRPTDEELKNFKADFTVLNGAKCTNPNWKEQGLNSENFVAFNITEGIQLIGGTWYGGEMKKGMFSMMNYFLPLKGVASMHCSANVGKDGDVAIFFGLSGTGKTTLSTDPKRQLIGDDEHGWDESGVFNFEGGCYAKTINLSQENEPDIYGAIRRDALLENVVVRADGSVDFDDGSKTENTRVSYPIYHIDNIVRPVSKAGHATKVIFLTADAFGVLPPVSKLTPEQTEYYFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPIQYADVLVERMKASGAEAYLVNTGWNGTGKRISIKDTRGIIDAILDGSIEKAEMGELPIFNLAIPKALPGVDPAILDPRDTYADKAQWQVKAEDLANRFVKNFVKYTANPEAAKLVGAGPK 537
SCOP domains d1ygga1 A:4-227 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) d1ygga2 A:228-539 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) SCOP domains
CATH domains 1yggA01 A:4-42,A:67-227 1yggA02 ---1yggA01 A:4-42,A:67-227 Phosphoenolpyruvate Carboxykinase, domain 1 1yggA03 A:228-283,A:344-539 1yggA02 A:43-63,A:284-341 --1yggA03 A:228-283,A:344-539 [code=3.90.228.20, no name defined] CATH domains
Pfam domains ---------------PEPCK_ATP-1yggA01 A:19-493 ---------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhh......ee...hhhhhhhhhh..........ee.....eee........hhh.eeee....................eeehhhhhhhhhhhhh.......eeeeeeee.......eeeeeee.hhhhhhhhhhhh..............eeeeee......hhhhhh.....eeeee....eeeee....hhhhhhhhhhhhhhhhhhh..eeee.eeee.....eeeee.....hhhhhh.....eeee..eeeee..eeee...eeeee........hhhhhhh.....eee..ee.....ee..........eeeee.hhh........ee..eeeeeeee.........eee.hhhhhhhhhhhheeee.--------..eeee.hhhhhhhh..hhhhhhhhhhhhhhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhh.eeee....eeee......hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ygg A 4 DLNKLVKELNDLGLTDVKEIVYNPSYEQLFEEETKPGLEGFDKGTLTTLGAVAVDTGIFTGRSPKDKYIVCDETTKDTVWWNSEAAKNDNKPMTQETWKSLRELVAKQLSGKRLFVVEGYCGASEKHRIGVRMVTEVAWQAHFVKNMFIRPTDEELKNFKADFTVLNGAKCTNPNWKEQGLNSENFVAFNITEGIQLIGGTWYGGEMKKGMFSMMNYFLPLKGVASMHCSANVGKDGDVAIFFGLSGTGKTTLSTDPKRQLIGDDEHGWDESGVFNFEGGCYAKTINLSQENEPDIYGAIRRDALLENVVVRADGSVDFDDGSKTENTRVSYPIYHIDNIVRPVSKAGHATKVIFLTADAFGVLPPVSKLTPEQTEYYFLSGFTAKL--------EPTPTFSACFGAAFLSLHPIQYADVLVERMKASGAEAYLVNTGWNGTGKRISIKDTRGIIDAILDGSIEKAEMGELPIFNLAIPKALPGVDPAILDPRDTYADKAQWQVKAEDLANRFVKNFVKYTANPEAAKLVGAGPK 539
13 23 33 43 53 63 73 83 || 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 384 | - | 404 414 424 434 444 454 464 474 484 494 504 514 524 534
88| 391 400
90
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |