1Y71 - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Title :   X-RAY CRYSTAL STRUCTURE OF KINASE-ASSOCIATED PROTEIN B FROM BACILLUS CEREUS

Authors :   J. Osipiuk, M. Zhou, S. Moy, F. Collart, A. Joachimiak, Midwest Center Structural Genomics (Mcsg)

Date :   07 Dec 04 (Deposition) - 18 Jan 05 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.95

Chains :   Asym./Biol. Unit : A,B

Keywords :   Structural Genomics, Kinase-Associated Protein B, Midwest Center For Structural Genomics, Mcsg, Protein Structure Initiative, Psi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. Osipiuk, M. Zhou, S. Moy, F. Collart, A. Joachimiak
X-Ray Crystal Structure Of Kinase-Associated Protein B From Bacillus Cereus
To Be Published
PubMed: search

Molecule 1 - KINASE-ASSOCIATED PROTEIN B
	Atcc	:	14579
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PMCSG7
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	BC4909
	Organism Scientific	:	BACILLUS CEREUS
	Organism Taxid	:	1396

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (1, 4)

No.	Name	Count	Type	Full Name
1	MSE	4	Mod. Amino Acid	SELENOMETHIONINE

(no "Site" information available for 1Y71)

(no "SS Bond" information available for 1Y71)

(no "Cis Peptide Bond" information available for 1Y71)

(no "SAP(SNP)/Variant" information available for 1Y71)

(no "PROSITE Motif" information available for 1Y71)

(no "Exon" information available for 1Y71)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:109
 aligned with Q816F1_BACCR | Q816F1 from UniProtKB/TrEMBL  Length:127

    Alignment length:124
                                    13        23        33        43        53        63        73        83        93       103       113       123    
         Q816F1_BACCR     4 TFEIGEIVTGIYKTGKYIGEVTNSRPGSYVVKVLAVLKHPVQGDLHNVKQANVPFFHERRALAFREQTNIPEQMVKKYEGEIPDYTESLKLALETQMNSFSEDDSPFAERSLETLQQLKKDYKL 127
               SCOP domains d1y71a1 A:4-127 Kinase-associated protein                B                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee..eeeeeeeeeee..eeeeeeeeeee....---------------.........eeeee...eee......hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                 1y71 A   4 TFEIGEIVTGIYKTGKYIGEVTNSRPGSYVVKVLAVLKHPVQ---------------ERRALAFREQTNIPEQmVKKYEGEIPDYTESLKLALETQmNSFSEDDSPFAERSLETLQQLKKDYKL 127
                                    13        23        33        43 |       -       |63        73   |    83        93      |103       113       123    
                                                                    45              61              77-MSE                100-MSE

Chain B from PDB  Type:PROTEIN  Length:112
 aligned with Q816F1_BACCR | Q816F1 from UniProtKB/TrEMBL  Length:127

    Alignment length:124
                                    13        23        33        43        53        63        73        83        93       103       113       123    
         Q816F1_BACCR     4 TFEIGEIVTGIYKTGKYIGEVTNSRPGSYVVKVLAVLKHPVQGDLHNVKQANVPFFHERRALAFREQTNIPEQMVKKYEGEIPDYTESLKLALETQMNSFSEDDSPFAERSLETLQQLKKDYKL 127
               SCOP domains d1y71b_ B: Kinase-associated protein B                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -----------KapB-1y71B01 B:15-127                                                                                             Pfam domains (1)
           Pfam domains (2) -----------KapB-1y71B02 B:15-127                                                                                             Pfam domains (2)
         Sec.struct. author ......eeeeee..eeeeeeeeeee..eeeeeeeeeee.....------------...........eeeee...eee......hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                 1y71 B   4 TFEIGEIVTGIYKTGKYIGEVTNSRPGSYVVKVLAVLKHPVQG------------FHERRALAFREQTNIPEQmVKKYEGEIPDYTESLKLALETQmNSFSEDDSPFAERSLETLQQLKKDYKL 127
                                    13        23        33        43  |      -     |  63        73   |    83        93      |103       113       123    
                                                                     46           59                77-MSE                100-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: SH3-like barrel (1035)

Superfamily: Kinase-associated protein B-like (1)

Family: Kinase-associated protein B-like (1)

Protein domain: Kinase-associated protein B (1)

Bacillus cereus [TaxId: 1396] (1)

1a	d1y71a1	A:4-127
1b	d1y71b_	B:

(no "CATH Domain" information available for 1Y71)

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: KapB] (1)

Family: KapB (1)

Bacillus cereus (strain ATCC 14579 / DSM 31) (1)

1a	KapB-1y71B01	B:15-127
1b	KapB-1y71B02	B:15-127

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (Q816F1_BACCR | Q816F1)

molecular function
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
biological process
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.

Asymmetric/Biological Unit
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	Sites
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(no "Cis Peptide Bonds" information available for 1y71)

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	1y71
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Description

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Ligands, Modified Residues, Ions (1, 4)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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Exons (0, 0)

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