Chain A from PDB Type:PROTEIN Length:402
aligned with CAIB_ECOLI | P31572 from UniProtKB/Swiss-Prot Length:405
Alignment length:402
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 383 393 403
CAIB_ECOLI 4 LPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED 405
SCOP domains d1xk6a1 A:4-405 Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB SCOP domains
CATH domains 1xk6A01 A:4-226,A:330-405 Crotonobetainyl-coa:carnitine coa-transferase; domain 1 1xk6A02 A:227-329 formyl-coa transferase, domain 3 1xk6A01 A:4-226,A:330-405 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ............eeeee...hhhhhhhhhhhhh..eeeeee.....hhhhhh.hhhhhhh...eeeee...hhhhhhhhhhhhh...eeeee...hhhhhh..hhhhhhhhh...eeeeee...............hhhhhhhhh.hhhh.ee..ee.....hhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhhhh..................eeeeee..eeeeee..hhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee..hhhhh..hhhhhhhh.eeeee.....eeeee....ee................hhhhhhhhh..hhhhhhhhhhh..ee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1xk6 A 4 LPmPKFGPLAGLRVVFSGIEIAGPFAGQmFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLmETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPmPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAmYEVmLRmGQYFmmDYFNGGEmCPRmSKGKDPYYAGCGLYKCADGYIVmELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTmDGRTCKGPNImPKFKNNPGQIWRGmPSHGmDTAAILKNIGYSENDIQELVSKGLAKVED 405
| 13 23 33 43 53 63 73 83 | 93 103 113 123 133 143 153 163 173 183 193 |203| | 213 223 | 233 243 | 253 263 273 283 293 303 313 323 333 343 | 353 | 363 373 | 383 393 403
| 32-MSE 86-MSE 161-MSE 200-MSE | || 221-MSE 248-MSE 346-MSE 357-MSE 371-MSE|
6-MSE 204-MSE || 225-MSE 376-MSE
207-MSE||
212-MSE
213-MSE
Chain B from PDB Type:PROTEIN Length:402
aligned with CAIB_ECOLI | P31572 from UniProtKB/Swiss-Prot Length:405
Alignment length:402
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 383 393 403
CAIB_ECOLI 4 LPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED 405
SCOP domains d1xk6b_ B: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB SCOP domains
CATH domains 1xk6B01 B:4-226,B:330-405 Crotonobetainyl-coa:carnitine coa-transferase; domain 1 1xk6B02 B:227-329 formyl-coa transferase, domain 3 1xk6B01 B:4-226,B:330-405 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ............eeeee...hhhhhhhhhhhhh..eeeeee.....hhhhhh.hhhhhhh...eeeee...hhhhhhhhhhhhh...eeeee...hhhhhh..hhhhhhhhh...eeeeee...............hhhhhhhhhhhhhhhee..ee.....hhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhhhh..................eeeeee..eeeeee..hhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhh..hhhhhhhh.eeeee.....eeeee....ee................hhhhhhhhh..hhhhhhhhhhh..ee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1xk6 B 4 LPmPKFGPLAGLRVVFSGIEIAGPFAGQmFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLmETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPmPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAmYEVmLRmGQYFmmDYFNGGEmCPRmSKGKDPYYAGCGLYKCADGYIVmELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTmDGRTCKGPNImPKFKNNPGQIWRGmPSHGmDTAAILKNIGYSENDIQELVSKGLAKVED 405
| 13 23 33 43 53 63 73 83 | 93 103 113 123 133 143 153 163 173 183 193 |203| | 213 223 | 233 243 | 253 263 273 283 293 303 313 323 333 343 | 353 | 363 373 | 383 393 403
6-MSE 32-MSE 86-MSE 161-MSE 200-MSE | || 221-MSE 248-MSE 346-MSE 357-MSE 371-MSE|
204-MSE || 225-MSE 376-MSE
207-MSE||
212-MSE
213-MSE
Chain C from PDB Type:PROTEIN Length:402
aligned with CAIB_ECOLI | P31572 from UniProtKB/Swiss-Prot Length:405
Alignment length:402
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 383 393 403
CAIB_ECOLI 4 LPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED 405
SCOP domains d1xk6c_ C: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB SCOP domains
CATH domains 1xk6C01 C:4-226,C:330-405 Crotonobetainyl-coa:carnitine coa-transferase; domain 1 1xk6C02 C:227-329 formyl-coa transferase, domain 3 1xk6C01 C:4-226,C:330-405 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ............eeeee...hhhhhhhhhhhhh..eeeeee.....hhhhhh.hhhhhhh...eeeee...hhhhhhhhhhhhh...eeeee...hhhhhh..hhhhhhhhh...eeeeee...............hhhhhhhhhhhhhhhee..ee.....hhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhhhh..................eeeeee..eeeeee..hhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhh..hhhhhhhh.eeeee.....eeeee....ee................hhhhhhhhh..hhhhhhhhhhh..ee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1xk6 C 4 LPmPKFGPLAGLRVVFSGIEIAGPFAGQmFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLmETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPmPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAmYEVmLRmGQYFmmDYFNGGEmCPRmSKGKDPYYAGCGLYKCADGYIVmELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTmDGRTCKGPNImPKFKNNPGQIWRGmPSHGmDTAAILKNIGYSENDIQELVSKGLAKVED 405
| 13 23 33 43 53 63 73 83 | 93 103 113 123 133 143 153 163 173 183 193 |203| | 213 223 | 233 243 | 253 263 273 283 293 303 313 323 333 343 | 353 | 363 373 | 383 393 403
6-MSE 32-MSE 86-MSE 161-MSE 200-MSE | || 221-MSE 248-MSE 346-MSE 357-MSE 371-MSE|
204-MSE || 225-MSE 376-MSE
207-MSE||
212-MSE
213-MSE
Chain D from PDB Type:PROTEIN Length:402
aligned with CAIB_ECOLI | P31572 from UniProtKB/Swiss-Prot Length:405
Alignment length:402
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 383 393 403
CAIB_ECOLI 4 LPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED 405
SCOP domains d1xk6d_ D: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB SCOP domains
CATH domains 1xk6D01 D:4-226,D:330-405 Crotonobetainyl-coa:carnitine coa-transferase; domain 1 1xk6D02 D:227-329 formyl-coa transferase, domain 3 1xk6D01 D:4-226,D:330-405 CATH domains
Pfam domains (1) -----------------------------------------------------------------CoA_transf_3-1xk6D01 D:69-258 --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
Pfam domains (2) -----------------------------------------------------------------CoA_transf_3-1xk6D02 D:69-258 --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
Pfam domains (3) -----------------------------------------------------------------CoA_transf_3-1xk6D03 D:69-258 --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
Pfam domains (4) -----------------------------------------------------------------CoA_transf_3-1xk6D04 D:69-258 --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (4)
Sec.struct. author ............eeeee...hhhhhhhhhhhhh..eeeeee.....hhhhhh.hhhhhhh...eeee....hhhhhhhhhhhhh...eeeee...hhhhhh..hhhhhhhhh...eeeeee...............hhhhhhhhhhhhhhhee..ee.....hhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhhhh..................eeeeee..eeeeee..hhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhh.hhhhhhhhhhhh..eeee..hhhhh..hhhhhhhh.eeeee.....eeeee....ee................hhhhhhhhh..hhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1xk6 D 4 LPmPKFGPLAGLRVVFSGIEIAGPFAGQmFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLmETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPmPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAmYEVmLRmGQYFmmDYFNGGEmCPRmSKGKDPYYAGCGLYKCADGYIVmELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTmDGRTCKGPNImPKFKNNPGQIWRGmPSHGmDTAAILKNIGYSENDIQELVSKGLAKVED 405
| 13 23 33 43 53 63 73 83 | 93 103 113 123 133 143 153 163 173 183 193 |203| | 213 223 | 233 243 | 253 263 273 283 293 303 313 323 333 343 | 353 | 363 373 | 383 393 403
6-MSE 32-MSE 86-MSE 161-MSE 200-MSE | || 221-MSE 248-MSE 346-MSE 357-MSE 371-MSE|
204-MSE || 225-MSE 376-MSE
207-MSE||
212-MSE
213-MSE
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |