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(-) Description

Title :  THE CRYSTAL STRUCTURES OF THE DNA BINDING SITES OF THE RUNX1 TRANSCRIPTION FACTOR
 
Authors :  M. Kitayner, H. Rozenberg, D. Rabinovich, Z. Shakked
Date :  26 Sep 04  (Deposition) - 15 Mar 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A,B
Keywords :  A-Dna, Double Helix, Overhanging Bases, Runx1 (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Kitayner, H. Rozenberg, D. Rabinovich, Z. Shakked
Structures Of The Dna-Binding Site Of Runt-Domain Transcription Regulators.
Acta Crystallogr. , Sect. D V. 61 236 2005
PubMed-ID: 15735333  |  Reference-DOI: 10.1107/S0907444904032378
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 5'-D(*TP*CP*TP*GP*CP*GP*GP*TP*C)-3'
    ChainsA
    EngineeredYES
    SyntheticYES
 
Molecule 2 - 5'-D(*TP*GP*AP*CP*CP*GP*CP*AP*G)-3'
    ChainsB
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1XJY)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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Chain A from PDB  Type:DNA  Length:9
                                        
                  1xjy A  1 TCTGCGGTC  9

Chain B from PDB  Type:DNA  Length:9
                                        
                  1xjy B 10 TGACCGCAG 18

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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(-) Related Entries Specified in the PDB File

1xjx THE SAME NUCLEIC ACID AT 1.7 ANGSTROM