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(-) Description

Title :  THE STRUCTURE OF A RIGOROUSLY CONSERVED RNA ELEMENT WITHIN THE SARS VIRUS GENOME
 
Authors :  M. P. Robertson, H. Igel, R. Baertsch, D. Haussler, M. Ares Jr. , W. G. Scott
Date :  24 Sep 04  (Deposition) - 01 Feb 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Rna, Gnra, 530-Like Loop, S2M, Stem-Loop, Purine Bulge, Sars (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. P. Robertson, H. Igel, R. Baertsch, D. Haussler, M. Ares Jr. , W. G. Scott
The Structure Of A Rigorously Conserved Rna Element Within The Sars Virus Genome
Plos Biol. V. 3 86 2005
PubMed-ID: 15630477  |  Reference-DOI: 10.1371/JOURNAL.PBIO.0030005
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - S2M RNA
    ChainsA
    EngineeredYES
    Other DetailsIN VITRO TRANSCRIPTION FROM T7 RNA POLYMERASE AND DNA TEMPLATE
    SyntheticYES

 Structural Features

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  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1GTP1Mod. NucleotideGUANOSINE-5'-TRIPHOSPHATE
2MG2Ligand/IonMAGNESIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREA A:12 , HOH A:203 , HOH A:204 , HOH A:205 , HOH A:206 , HOH A:207BINDING SITE FOR RESIDUE MG A 101
2AC2SOFTWAREA A:12 , HOH A:208 , HOH A:209 , HOH A:210 , HOH A:211 , HOH A:212BINDING SITE FOR RESIDUE MG A 201

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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Chain A from PDB  Type:RNA  Length:47
                                                                              
                  1xjr A  1 gGAGUUCACCGAGGCCACGCGGAGUACGAUCGAGGGUACAGUGAAUU 47
                            |       10        20        30        40       
                            |                                              
                            1-GTP                                          

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