Chain A from PDB Type:PROTEIN Length:366
aligned with ALR_MYCTO | P9WQA8 from UniProtKB/Swiss-Prot Length:386
Alignment length:371
22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
ALR_MYCTO 13 LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREA 383
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 1xfcA011xfcA02 A:18-233 Alanine racemase ----------------1xfcA01 A:11-17,A:250-381 Lyase, Ornithine Decarboxylase; Chain A, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeehhhhhhhhhhhhhhhh..eeeeehhhhhhh.hhhhhhhhhhhh...eeee.hhhhhhhhhhh.....eee........hhhhhhh..eeee.hhhhhhhhhhhhhhhh..eeeeee.............hhhhhhhhhhhhhhh..eeeeeee...-----..hhhhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhh..ee..hhhhhh...hhhhh.......eeeeee..eeeee....eehhhhhee....eeeeee..hhhhh.hhhhh...eeee..eeeeee.......eeeeee..........eeeee........hhhhhhhhhh.hhhhhhh.....eeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------ALANINE_RAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xfc A 11 LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHM-----PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREA 381
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380
173 179
Chain A from PDB Type:PROTEIN Length:366
aligned with ALR_MYCTU | P9WQA9 from UniProtKB/Swiss-Prot Length:386
Alignment length:371
22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
ALR_MYCTU 13 LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREA 383
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 1xfcA011xfcA02 A:18-233 Alanine racemase ----------------1xfcA01 A:11-17,A:250-381 Lyase, Ornithine Decarboxylase; Chain A, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeehhhhhhhhhhhhhhhh..eeeeehhhhhhh.hhhhhhhhhhhh...eeee.hhhhhhhhhhh.....eee........hhhhhhh..eeee.hhhhhhhhhhhhhhhh..eeeeee.............hhhhhhhhhhhhhhh..eeeeeee...-----..hhhhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhh..ee..hhhhhh...hhhhh.......eeeeee..eeeee....eehhhhhee....eeeeee..hhhhh.hhhhh...eeee..eeeeee.......eeeeee..........eeeee........hhhhhhhhhh.hhhhhhh.....eeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------ALANINE_RAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xfc A 11 LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHM-----PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREA 381
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 | 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380
173 179
Chain B from PDB Type:PROTEIN Length:356
aligned with ALR_MYCTO | P9WQA8 from UniProtKB/Swiss-Prot Length:386
Alignment length:371
22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
ALR_MYCTO 13 LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREA 383
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 1xfcB011xfcB02 B:18-233 Alanine racemase ----------------1xfcB01 B:11-1 7,B:250-381 Lyase, Ornithine Decarboxylase; Chain A, domain 1 CATH domains
Pfam domains (1) -----Ala_racemase_N-1xfcB01 B:16-238 -----------Ala_racemase_C -1xfcB03 B:250-379 -- Pfam domains (1)
Pfam domains (2) -----Ala_racemase_N-1xfcB02 B:16-238 -----------Ala_racemase_C -1xfcB04 B:250-379 -- Pfam domains (2)
Sec.struct. author .eeeeeehhhhhhhhhhhhhhhh..eeeeehhhhhhh.hhhhhhhhhhhh...eeee.hhhhhhhhhhh.....eee........hhhhhhh..eeee.hhhhhhhhhhhhhhhh..eeeeee.............hhhhhhhhhhhhhhh..eeeeeee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeehhhhhhhhhhhh..ee..hhhhhh...hhhhh.......eeeeee..eeeee---------------..eeeeee..hhhhh.hhhhh...eeee..eeeeee.......eeeeee..........eeeee........hhhhhhhhhh.hhhhhhh.....eeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------------------------ALANINE_RAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xfc B 11 LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSI---------------RDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREA 381
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 | - 280 290 300 310 320 330 340 350 360 370 380
263 279
Chain B from PDB Type:PROTEIN Length:356
aligned with ALR_MYCTU | P9WQA9 from UniProtKB/Swiss-Prot Length:386
Alignment length:371
22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
ALR_MYCTU 13 LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREA 383
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 1xfcB011xfcB02 B:18-233 Alanine racemase ----------------1xfcB01 B:11-1 7,B:250-381 Lyase, Ornithine Decarboxylase; Chain A, domain 1 CATH domains
Pfam domains (1) -----Ala_racemase_N-1xfcB01 B:16-238 -----------Ala_racemase_C -1xfcB03 B:250-379 -- Pfam domains (1)
Pfam domains (2) -----Ala_racemase_N-1xfcB02 B:16-238 -----------Ala_racemase_C -1xfcB04 B:250-379 -- Pfam domains (2)
Sec.struct. author .eeeeeehhhhhhhhhhhhhhhh..eeeeehhhhhhh.hhhhhhhhhhhh...eeee.hhhhhhhhhhh.....eee........hhhhhhh..eeee.hhhhhhhhhhhhhhhh..eeeeee.............hhhhhhhhhhhhhhh..eeeeeee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeehhhhhhhhhhhh..ee..hhhhhh...hhhhh.......eeeeee..eeeee---------------..eeeeee..hhhhh.hhhhh...eeee..eeeeee.......eeeeee..........eeeee........hhhhhhhhhh.hhhhhhh.....eeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------ALANINE_RAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1xfc B 11 LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSI---------------RDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREA 381
20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 | - 280 290 300 310 320 330 340 350 360 370 380
263 279
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |