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(-) Description

Title :  SOLUTION NMR STRUCTURE OF PROTEIN TA0354 FROM THERMOPLASMA ACIDOPHILUM. ONTARIO CENTER FOR STRUCTURAL PROTEOMICS TARGET TA0354_69_121; NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TAT38.
 
Authors :  B. Wu, A. Yee, Y. J. Huang, T. A. Ramelot, A. Semesi, A. Lemak, A. Edward, M. Kennedy, G. T. Montelione, C. H. Arrowsmith, Northeast Structural Genomics Consortium (Nesg), Ontario Center For Structural Proteomics (Ocsp)
Date :  20 Aug 04  (Deposition) - 14 Dec 04  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Alpha Protein, Structural Genomics, Protein Structure Initiative, Psi, Northeast Structural Genomics Consortium, Nesg, Ontario Center For Structural Proteomics, Ocsp, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Wu, A. Yee, Y. J. Huang, T. A. Ramelot, A. Semesi, A. Lemak, A. Edward, M. Kennedy, G. T. Montelione, C. H. Arrowsmith
Solution Structure Of Hypothetical Membrane Protein Ta0354_69_121 From Thermoplasma Acidophilum
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL MEMBRANE PROTEIN TA0354_69_121
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET15B
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 69-212
    Organism Scientific: THERMOPLASMA ACIDOPHILUM
    Organism Taxid: 2303

 Structural Features

(-) Chains, Units

  
NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:53
 aligned with Q9HL76_THEAC | Q9HL76 from UniProtKB/TrEMBL  Length:121

    Alignment length:53
                                    78        88        98       108       118   
         Q9HL76_THEAC    69 RNLSDRAKFESMINSPSKSVFVRNLNELEALAVRLGKSYRIQLDQAKEKWKVK 121
               SCOP domains d1x9ba_ A:                                            SCOP domains
               CATH domains 1x9bA00 A:1-53                                        CATH domains
               Pfam domains --DUF3198-1x9bA01 A:3-53                              Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------- Transcript
                 1x9b A   1 RNLSDRAKFESMINSPSKSVFVRNLNELEALAVRLGKSYRIQLDQAKEKWKVK  53
                                    10        20        30        40        50
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: DUF3198] (1)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (Q9HL76_THEAC | Q9HL76)
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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 Related Entries

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(-) Related Entries Specified in the PDB File

6291 RELATED ID: TAT38 RELATED DB: TARGETDB