Chain A from PDB Type:PROTEIN Length:151
aligned with PMEI1_ARATH | Q9LNF2 from UniProtKB/Swiss-Prot Length:176
Alignment length:151
35 45 55 65 75 85 95 105 115 125 135 145 155 165 175
PMEI1_ARATH 26 ITSSEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLPRN 176
SCOP domains d1x8za_ A: Pectin methylesterase inhibitor 1, PMEI1 SCOP domains
CATH domains 1x8zA00 A:-1-149 Invertase/pectin methylesterase inhibitor family protein CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhh...hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1x8z A -1 MDSSEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLPRN 149
8 18 28 38 48 58 68 78 88 98 108 118 128 138 148
Chain B from PDB Type:PROTEIN Length:147
aligned with PMEI1_ARATH | Q9LNF2 from UniProtKB/Swiss-Prot Length:176
Alignment length:147
38 48 58 68 78 88 98 108 118 128 138 148 158 168
PMEI1_ARATH 29 SEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLPR 175
SCOP domains d1x8zb_ B: Pectin methylesterase inhibitor 1, PMEI1 SCOP domains
CATH domains 1x8zB00 B:2-148 Invertase/pectin methylesterase inhibitor family protein CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhh...hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1x8z B 2 SEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLPR 148
11 21 31 41 51 61 71 81 91 101 111 121 131 141
Chain C from PDB Type:PROTEIN Length:150
aligned with PMEI1_ARATH | Q9LNF2 from UniProtKB/Swiss-Prot Length:176
Alignment length:150
36 46 56 66 76 86 96 106 116 126 136 146 156 166 176
PMEI1_ARATH 27 TSSEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLPRN 176
SCOP domains d1x8zc_ C: Pectin methylesterase inhibitor 1, PMEI1 SCOP domains
CATH domains 1x8zC00 C:0-149 Invertase/pectin methylesterase inhibitor family protein CATH domains
Pfam domains (1) -PMEI-1x8zC01 C:1-142 ------- Pfam domains (1)
Pfam domains (2) -PMEI-1x8zC02 C:1-142 ------- Pfam domains (2)
Pfam domains (3) -PMEI-1x8zC03 C:1-142 ------- Pfam domains (3)
Sec.struct. author ..hhhhhhhh...hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1x8z C 0 DSSEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLPRN 149
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |