Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  STRUCTURE OF A CYANOBACTERIAL BLUF PROTEIN, TLL0078
 
Authors :  A. Kita, K. Okajima, Y. Morimoto, M. Ikeuchi, K. Miki
Date :  27 Mar 05  (Deposition) - 07 Jun 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J
Keywords :  Bluf, Tll0078, Fad, Structural Genomics, Electron Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. Kita, K. Okajima, Y. Morimoto, M. Ikeuchi, K. Miki
Structure Of A Cyanobacterial Bluf Protein, Tll0078, Containing A Novel Fad-Binding Blue Light Sensor Domain
J. Mol. Biol. V. 349 1 2005
PubMed-ID: 15876364  |  Reference-DOI: 10.1016/J.JMB.2005.03.067

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN TLL0078
    ChainsA, B, C, D, E, F, G, H, I, J
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism ScientificTHERMOSYNECHOCOCCUS ELONGATUS
    Organism Taxid197221
    StrainBP-1

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric/Biological Unit ABCDEFGHIJ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 10)

Asymmetric/Biological Unit (1, 10)
No.NameCountTypeFull Name
1FAD10Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:108 , ILE A:124 , LYS A:127 , SER A:128 , ASN A:131 , ASN A:132 , PHE A:148 , GLN A:150 , LEU A:152 , THR A:162 , ARG A:165 , ILE A:166 , ASP A:169 , ARG A:171 , ASP D:3014BINDING SITE FOR RESIDUE FAD A 9150
02AC2SOFTWARETYR B:1008 , ILE B:1024 , SER B:1028 , ASN B:1031 , ASN B:1032 , PHE B:1048 , GLN B:1050 , THR B:1062 , ARG B:1065 , ILE B:1066 , ASP B:1069 , ARG B:1071 , HIS B:1072BINDING SITE FOR RESIDUE FAD B 9151
03AC3SOFTWARETYR C:2008 , ILE C:2024 , SER C:2028 , ASN C:2031 , ASN C:2032 , PHE C:2048 , GLN C:2050 , LEU C:2052 , THR C:2062 , ARG C:2065 , ILE C:2066 , ASP C:2069 , ARG C:2071 , HIS C:2072 , MET C:2093 , ASP J:9014BINDING SITE FOR RESIDUE FAD C 9152
04AC4SOFTWARETYR D:3008 , ILE D:3024 , SER D:3028 , ASN D:3031 , ASN D:3032 , PHE D:3048 , GLN D:3050 , LEU D:3052 , THR D:3062 , ARG D:3065 , ILE D:3066 , ASP D:3069 , ARG D:3071 , HIS D:3072BINDING SITE FOR RESIDUE FAD D 9153
05AC5SOFTWARETYR E:4008 , ILE E:4024 , SER E:4028 , ASN E:4031 , ASN E:4032 , PHE E:4048 , GLN E:4050 , LEU E:4052 , THR E:4062 , ARG E:4065 , ILE E:4066 , ASP E:4069 , ARG E:4071 , MET E:4093BINDING SITE FOR RESIDUE FAD E 9154
06AC6SOFTWARETYR F:5008 , ILE F:5024 , SER F:5028 , ASN F:5031 , ASN F:5032 , LEU F:5041 , PHE F:5048 , GLN F:5050 , LEU F:5052 , THR F:5062 , ARG F:5065 , ILE F:5066 , ASP F:5069 , MET F:5093BINDING SITE FOR RESIDUE FAD F 9155
07AC7SOFTWARETYR G:6008 , ILE G:6024 , SER G:6028 , ASN G:6031 , ASN G:6032 , PHE G:6048 , GLN G:6050 , LEU G:6052 , THR G:6062 , ARG G:6065 , ILE G:6066 , ASP G:6069BINDING SITE FOR RESIDUE FAD G 9156
08AC8SOFTWARETYR H:7008 , ILE H:7024 , LYS H:7027 , SER H:7028 , ASN H:7031 , ASN H:7032 , PHE H:7048 , GLN H:7050 , LEU H:7052 , ARG H:7065 , ILE H:7066 , ASP H:7069 , HIS H:7072BINDING SITE FOR RESIDUE FAD H 9157
09AC9SOFTWARETYR I:8008 , ILE I:8024 , SER I:8028 , ASN I:8031 , ASN I:8032 , LEU I:8041 , PHE I:8048 , GLN I:8050 , LEU I:8052 , THR I:8062 , ARG I:8065 , ILE I:8066 , ASP I:8069 , ARG I:8071BINDING SITE FOR RESIDUE FAD I 9158
10BC1SOFTWARETYR J:9008 , ILE J:9024 , SER J:9028 , ASN J:9031 , ASN J:9032 , PHE J:9048 , GLN J:9050 , LEU J:9052 , THR J:9062 , ARG J:9065 , ILE J:9066 , ASP J:9069 , ARG J:9071 , HIS J:9072 , MET J:9093BINDING SITE FOR RESIDUE FAD J 9159

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1X0P)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1X0P)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1X0P)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1X0P)

(-) Exons   (0, 0)

(no "Exon" information available for 1X0P)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:142
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:142
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141  
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMSQGS  143
               SCOP domains d1x0pa1 A:102-243 Hypothetical protein Tll0078                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeehhhhhhhhhhhhh...eeeeeeeeeee............eee.hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1x0p A  102 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMSQGS  243
                                   111       121       131       141       151       161       171       181       191       201       211       221       231       241  

Chain B from PDB  Type:PROTEIN  Length:139
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:139
                                    11        21        31        41        51        61        71        81        91       101       111       121       131         
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS  140
               SCOP domains d1x0pb_ B: Hypothetical protein Tll0078                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeehhhhhhhhhhhh....eeeeeeeeeee...........eeee.hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1x0p B 1002 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS 1140
                                  1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131         

Chain C from PDB  Type:PROTEIN  Length:139
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:139
                                    11        21        31        41        51        61        71        81        91       101       111       121       131         
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS  140
               SCOP domains d1x0pc_ C: Hypothetical protein Tll0078                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeehhhhhhhhhhhh....eeeeeeeeeee...........eeee.hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1x0p C 2002 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS 2140
                                  2011      2021      2031      2041      2051      2061      2071      2081      2091      2101      2111      2121      2131         

Chain D from PDB  Type:PROTEIN  Length:139
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:139
                                    11        21        31        41        51        61        71        81        91       101       111       121       131         
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS  140
               SCOP domains d1x0pd_ D: Hypothetical protein Tll0078                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeehhhhhhhhhhhh....eeeeeeeeeee...........eeee.hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1x0p D 3002 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS 3140
                                  3011      3021      3031      3041      3051      3061      3071      3081      3091      3101      3111      3121      3131         

Chain E from PDB  Type:PROTEIN  Length:141
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:141
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141 
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMSQG  142
               SCOP domains d1x0pe_ E: Hypothetical protein Tll0078                                                                                                       SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeehhhhhhhhhhhh....eeeeeeeeeee...........eeee.hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1x0p E 4002 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMSQG 4142
                                  4011      4021      4031      4041      4051      4061      4071      4081      4091      4101      4111      4121      4131      4141 

Chain F from PDB  Type:PROTEIN  Length:142
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:142
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141  
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMSQGS  143
               SCOP domains d1x0pf_ F: Hypothetical protein Tll0078                                                                                                        SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeehhhhhhhhhhhhhh..eeeeeeeeeee...........eeee.hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1x0p F 5002 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMSQGS 5143
                                  5011      5021      5031      5041      5051      5061      5071      5081      5091      5101      5111      5121      5131      5141  

Chain G from PDB  Type:PROTEIN  Length:139
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:139
                                    11        21        31        41        51        61        71        81        91       101       111       121       131         
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS  140
               SCOP domains d1x0pg_ G: Hypothetical protein Tll0078                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeehhhhhhhhhhhh....eeeeeeeeeee...........eeee.hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1x0p G 6002 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS 6140
                                  6011      6021      6031      6041      6051      6061      6071      6081      6091      6101      6111      6121      6131         

Chain H from PDB  Type:PROTEIN  Length:138
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:138
                                    11        21        31        41        51        61        71        81        91       101       111       121       131        
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDM  139
               SCOP domains d1x0ph_ H: Hypothetical protein Tll0078                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhh..eeeeeee..eeeeeeeeehhhhhhhhhhhhh...eeeeeeeeeee...........eeee.hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                1x0p H 7002 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDM 7139
                                  7011      7021      7031      7041      7051      7061      7071      7081      7091      7101      7111      7121      7131        

Chain I from PDB  Type:PROTEIN  Length:141
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:141
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141 
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMSQG  142
               SCOP domains d1x0pi_ I: Hypothetical protein Tll0078                                                                                                       SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhh..eeeeeee..eeeeeeeeehhhhhhhhhhhh....eeeeeeeeeee...........eeee......hhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1x0p I 8002 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMSQG 8142
                                  8011      8021      8031      8041      8051      8061      8071      8081      8091      8101      8111      8121      8131      8141 

Chain J from PDB  Type:PROTEIN  Length:139
 aligned with Q8DMN3_THEEB | Q8DMN3 from UniProtKB/TrEMBL  Length:143

    Alignment length:139
                                    11        21        31        41        51        61        71        81        91       101       111       121       131         
        Q8DMN3_THEEB      2 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS  140
               SCOP domains d1x0pj_ J: Hypothetical protein Tll0078                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -BLUF-1x0pJ01 J:9003-9095                                                                     --------------------------------------------- Pfam domains (1)
           Pfam domains (2) -BLUF-1x0pJ02 J:9003-9095                                                                     --------------------------------------------- Pfam domains (2)
           Pfam domains (3) -BLUF-1x0pJ03 J:9003-9095                                                                     --------------------------------------------- Pfam domains (3)
           Pfam domains (4) -BLUF-1x0pJ04 J:9003-9095                                                                     --------------------------------------------- Pfam domains (4)
           Pfam domains (5) -BLUF-1x0pJ05 J:9003-9095                                                                     --------------------------------------------- Pfam domains (5)
           Pfam domains (6) -BLUF-1x0pJ06 J:9003-9095                                                                     --------------------------------------------- Pfam domains (6)
           Pfam domains (7) -BLUF-1x0pJ07 J:9003-9095                                                                     --------------------------------------------- Pfam domains (7)
           Pfam domains (8) -BLUF-1x0pJ08 J:9003-9095                                                                     --------------------------------------------- Pfam domains (8)
           Pfam domains (9) -BLUF-1x0pJ09 J:9003-9095                                                                     --------------------------------------------- Pfam domains (9)
          Pfam domains (10) -BLUF-1x0pJ10 J:9003-9095                                                                     --------------------------------------------- Pfam domains (10)
         Sec.struct. author .eeeeeeeeee....hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeeehhhhhhhhhhhhh...eeeeeeeeeee...........eeee.hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                1x0p J 9002 GLHRLIYLSCATDGLSYPDLRDIMAKSEVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSETYARILKDPRHHSAEIVEFKAIEERTFINWSMRLVQLGEMDSDTIRRLRLKYSPAATFQPRSMTAEQCFRFLKELYDMS 9140
                                  9011      9021      9031      9041      9051      9061      9071      9081      9091      9101      9111      9121      9131         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 10)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1X0P)

(-) Pfam Domains  (1, 10)

Asymmetric/Biological Unit
(-)
Family: BLUF (3)
1aBLUF-1x0pJ01J:9003-9095
1bBLUF-1x0pJ02J:9003-9095
1cBLUF-1x0pJ03J:9003-9095
1dBLUF-1x0pJ04J:9003-9095
1eBLUF-1x0pJ05J:9003-9095
1fBLUF-1x0pJ06J:9003-9095
1gBLUF-1x0pJ07J:9003-9095
1hBLUF-1x0pJ08J:9003-9095
1iBLUF-1x0pJ09J:9003-9095
1jBLUF-1x0pJ10J:9003-9095

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J   (Q8DMN3_THEEB | Q8DMN3)
molecular function
    GO:0071949    FAD binding    Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
    GO:0009882    blue light photoreceptor activity    The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 400-470nm. The response may involve a change in conformation.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0009785    blue light signaling pathway    The series of molecular signals initiated upon sensing of blue light by photoreceptor molecule, at a wavelength between 400nm and 470nm.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    FAD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1x0p)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1x0p
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q8DMN3_THEEB | Q8DMN3
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  Q8DMN3_THEEB | Q8DMN3
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 1X0P)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1X0P)