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(-) Description

Title :  CRYSTAL STRUCTURE OF THE HYPOTHETICAL PROTEIN TT1805 FROM THERMUS THERMOPHILLUS HB8
 
Authors :  A. A. Pioszak, S. Kishishita, M. Shirouzu, S. Kuramitsu, S. Yokoyama, R Structural Genomics/Proteomics Initiative (Rsgi)
Date :  28 Jul 04  (Deposition) - 28 Jan 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.58
Chains :  Asym./Biol. Unit :  A
Keywords :  Thermus Thermophillus, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. A. Pioszak, S. Kishishita, M. Shirouzu, S. Kuramitsu, S. Yokoyama
Crystal Structure Of The Hypothetical Protein Tt1805 From Thermus Thermophillus Hb8
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - THE HYPOTHETICAL PROTEIN (TT1805)
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET11
    Expression System Strain: B834(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 300852
    Strain: HB8

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric/Biological Unit (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 1WNA)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1WNA)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1WNA)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1WNA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1WNA)

(-) Exons   (0, 0)

(no "Exon" information available for 1WNA)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:127
 aligned with Q5SI52_THET8 | Q5SI52 from UniProtKB/TrEMBL  Length:131

    Alignment length:127
                                    10        20        30        40        50        60        70        80        90       100       110       120       
         Q5SI52_THET8     1 MVRVGMRAAPRVSLEALKAALGGLKLSEAKVYLITDWQDKRDQARYALLLHTGKKDLLVPDAFGPAFPGGEEALSELVGLLLAQGARRFYEAVVSPGEMTALLDLPPEELLKRVMAIANPTDPGIYL 127
               SCOP domains d1wnaa_ A: automated matches                                                                                                    SCOP domains
               CATH domains -1wnaA00 A:2-127 hypothetical protein tt1805                                                                                    CATH domains
               Pfam domains -------------DUF3197-1wnaA01 A:14-126                                                                                         - Pfam domains
         Sec.struct. author .ee.....hhhhhhhhhhhhhh.......eeeeeee.........eeeeee....eeeeeeee.....hhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhh.hhhhhhhhhhhhhee.hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wna A   1 mVRVGmRAAPRVSLEALKAALGGLKLSEAKVYLITDWQDKRDQARYALLLHTGKKDLLVPDAFGPAFPGGEEALSELVGLLLAQGARRFYEAVVSPGEmTALLDLPPEELLKRVmAIANPTDPGIYL 127
                            |    |  10        20        30        40        50        60        70        80        90       100       110    |  120       
                            |    |                                                                                           99-MSE         115-MSE        
                            1-MSE|                                                                                                                         
                                 6-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: DUF3197] (2)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q5SI52_THET8 | Q5SI52: 1wn9 4hea

(-) Related Entries Specified in the PDB File

1wn9 ALTERNATIVE CRYSTAL FORM FOR THE SAME PROTEIN RELATED ID: TTK003001805.2 RELATED DB: TARGETDB