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(-) Description

Title :  C2 DOMAIN-CONTAINING PROTEIN FROM PUTATIVE ELICITOR-RESPONSIVE GENE
 
Authors :  T. Nagashima, F. Hayashi, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date :  26 May 04  (Deposition) - 26 Nov 04  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  C2 Domain, Elicitor-Responsive Gene, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Plant Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Nagashima, F. Hayashi, S. Yokoyama
C2 Domain-Containing Protein From Putative Elicitor-Responsive Gene
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PUTATIVE ELICITOR-RESPONSIVE GENE
    Chains: A
    Engineered: YES
    Expression System Plasmid: P031104-14
    Expression System Vector Type: PLASMID
    Fragment: C2 DOMAIN
    Gene: RIKEN CDNA RAFL05-11-F09
    Organism Common: THALE CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Other Details: CELL-FREE PROTEIN SYNTHESIS

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1WFJ)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1WFJ)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1WFJ)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1C2PS50004 C2 domain profile.Y1322_ARATH1-87  1A:8-93

(-) Exons   (0, 0)

(no "Exon" information available for 1WFJ)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:136
 aligned with Y1322_ARATH | Q9C8S6 from UniProtKB/Swiss-Prot  Length:147

    Alignment length:137
                                  1                                                                                                                                  
                                  |  4        14        24        34        44        54        64        74        84        94       104       114       124       
          Y1322_ARATH     - ------MPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSENRSRG 131
               SCOP domains d1wfja_ A: C2 domain protein At1g63220                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------C2-1wfjA01 A:12-93                                                                -------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeeeeeeeee.............eeee....eee...........eeeeeeeeeee....eeeeee............eeeeeehhhhhhhheeeeeeeeeee..eeeeeeeeeeeeee.-..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------C2  PDB: A:8-93 UniProt: 1-87                                                          -------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wfj A   1 GSSGSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS-GPSSG 136
                                    10        20        30        40        50        60        70        80        90       100       110       120       130| |    
                                                                                                                                                            131 |    
                                                                                                                                                              132
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1WFJ)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: C2 (71)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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