1VTF - JenaLib

Title :   STRUCTURE OF 5'-D(*(BRO)CP*GP*(BRO)CP*G)-3' IN COMPLEX WITH PROFLAVINE

Authors :   E. Westhof, M. V. Hosur, M. Sundaralingam

Date :   13 Dec 88 (Deposition) - 13 Jul 11 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym./Biol. Unit : A,B

Keywords :   Right Handed Dna, Double Helix, Complexed With Drug, Modified, Deoxyribonucleic Acid, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. Westhof, M. V. Hosur, M. Sundaralingam
Nonintercalative Binding Of Proflavin To Z-Dna: Structure O A Complex Between D(5Brc-G-5Brc-G) And Proflavin
Biochemistry V. 27 5742 1988
PubMed: search

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 10)

Sites (6, 6)

Asymmetric Unit (6, 6)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	CBR A:1 , CBR A:3 , DG A:4 , PRL A:12 , PRL A:13 , CBR B:5 , DG B:6 , CBR B:7 , DG B:8 , PRL B:10 , PRL B:11 , PRL B:14	BINDING SITE FOR RESIDUE PRL B 9
2	AC2	SOFTWARE	CBR A:1 , DG A:2 , CBR A:3 , DG A:4 , PRL A:13 , CBR B:5 , DG B:6 , CBR B:7 , DG B:8 , PRL B:9 , PRL B:11 , PRL B:14	BINDING SITE FOR RESIDUE PRL B 10
3	AC3	SOFTWARE	CBR A:1 , DG A:2 , PRL A:12 , PRL A:13 , CBR B:5 , DG B:6 , CBR B:7 , DG B:8 , PRL B:9 , PRL B:10 , PRL B:14	BINDING SITE FOR RESIDUE PRL B 11
4	AC4	SOFTWARE	CBR A:1 , DG A:2 , CBR A:3 , DG A:4 , PRL A:13 , DG B:6 , CBR B:7 , DG B:8 , PRL B:9 , PRL B:11 , PRL B:14	BINDING SITE FOR RESIDUE PRL A 12
5	AC5	SOFTWARE	CBR A:1 , DG A:2 , CBR A:3 , DG A:4 , PRL A:12 , CBR B:5 , DG B:6 , CBR B:7 , DG B:8 , PRL B:9 , PRL B:10 , PRL B:11 , PRL B:14	BINDING SITE FOR RESIDUE PRL A 13
6	AC6	SOFTWARE	CBR A:1 , DG A:2 , CBR A:3 , DG A:4 , PRL A:12 , PRL A:13 , CBR B:5 , DG B:6 , CBR B:7 , DG B:8 , PRL B:9 , PRL B:10 , PRL B:11	BINDING SITE FOR RESIDUE PRL B 14

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

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Chain A from PDB  Type:DNA  Length:4
                                  
                   1vtf A 1 cGcG 4
                            | | 
                            | | 
                            1-CBR
                              3-CBR

Chain B from PDB  Type:DNA  Length:4
                                  
                   1vtf B 5 cGcG 8
                            | | 
                            | | 
                            5-CBR
                              7-CBR

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

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Gene Ontology (0, 0)

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