Chain A from PDB Type:PROTEIN Length:105
aligned with A9CLJ4_AGRFC | A9CLJ4 from UniProtKB/TrEMBL Length:104
Alignment length:105
1
| 9 19 29 39 49 59 69 79 89 99
A9CLJ4_AGRFC - -MIVEERIYRIRGGKMQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHMWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
SCOP domains -d1vqya1 A:1-104 Hypothetical protein Atu5224 SCOP domains
CATH domains 1vqyA00 A:0-104 [code=3.30.70.900, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
1vqy A 0 HmIVEERIYRIRGGKmQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHmWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
| 9 | 19 29 39 49 | 59 69 79 89 99
| 15-MSE 54-MSE
1-MSE
Chain B from PDB Type:PROTEIN Length:114
aligned with A9CLJ4_AGRFC | A9CLJ4 from UniProtKB/TrEMBL Length:104
Alignment length:114
1
-| 10 20 30 40 50 60 70 80 90 100
A9CLJ4_AGRFC - ----------MIVEERIYRIRGGKMQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHMWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
SCOP domains d1vqyb_ B: automated matches SCOP domains
CATH domains -----------1vqyB01 B:2-96 [code=3.30.70.900, no name defined] -------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...........eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
1vqy B -9 SDKIHHHHHHmIVEERIYRIRGGKmQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHmWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
0| 10 | 20 30 40 50 | 60 70 80 90 100
1-MSE 15-MSE 54-MSE
Chain C from PDB Type:PROTEIN Length:105
aligned with A9CLJ4_AGRFC | A9CLJ4 from UniProtKB/TrEMBL Length:104
Alignment length:105
1
| 9 19 29 39 49 59 69 79 89 99
A9CLJ4_AGRFC - -MIVEERIYRIRGGKMQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHMWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
SCOP domains d1vqyc_ C: automated matches SCOP domains
CATH domains 1vqyC00 C:0-104 [code=3.30.70.900, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
1vqy C 0 HmIVEERIYRIRGGKmQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHmWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
| 9 | 19 29 39 49 | 59 69 79 89 99
1-MSE 15-MSE 54-MSE
Chain D from PDB Type:PROTEIN Length:104
aligned with A9CLJ4_AGRFC | A9CLJ4 from UniProtKB/TrEMBL Length:104
Alignment length:104
10 20 30 40 50 60 70 80 90 100
A9CLJ4_AGRFC 1 MIVEERIYRIRGGKMQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHMWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
SCOP domains d1vqyd_ D: automated matches SCOP domains
CATH domains -1vqyD00 D:2-104 [code=3.30.70.900, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
1vqy D 1 mIVEERIYRIRGGKmQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHmWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
| 10 | 20 30 40 50 | 60 70 80 90 100
1-MSE 15-MSE 54-MSE
Chain E from PDB Type:PROTEIN Length:104
aligned with A9CLJ4_AGRFC | A9CLJ4 from UniProtKB/TrEMBL Length:104
Alignment length:104
10 20 30 40 50 60 70 80 90 100
A9CLJ4_AGRFC 1 MIVEERIYRIRGGKMQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHMWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
SCOP domains d1vqye_ E: automated matches SCOP domains
CATH domains -1vqyE00 E:2-104 [code=3.30.70.900, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
1vqy E 1 mIVEERIYRIRGGKmQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHmWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
| 10 | 20 30 40 50 | 60 70 80 90 100
1-MSE 15-MSE 54-MSE
Chain F from PDB Type:PROTEIN Length:105
aligned with A9CLJ4_AGRFC | A9CLJ4 from UniProtKB/TrEMBL Length:104
Alignment length:105
1
| 9 19 29 39 49 59 69 79 89 99
A9CLJ4_AGRFC - -MIVEERIYRIRGGKMQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHMWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
SCOP domains d1vqyf_ F: automated matches SCOP domains
CATH domains 1vqyF00 F:0-104 [code=3.30.70.900, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
1vqy F 0 HmIVEERIYRIRGGKmQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHmWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
| 9 | 19 29 39 49 | 59 69 79 89 99
1-MSE 15-MSE 54-MSE
Chain G from PDB Type:PROTEIN Length:105
aligned with A9CLJ4_AGRFC | A9CLJ4 from UniProtKB/TrEMBL Length:104
Alignment length:105
1
| 9 19 29 39 49 59 69 79 89 99
A9CLJ4_AGRFC - -MIVEERIYRIRGGKMQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHMWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
SCOP domains d1vqyg_ G: automated matches SCOP domains
CATH domains 1vqyG00 G:0-104 [code=3.30.70.900, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
1vqy G 0 HmIVEERIYRIRGGKmQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHmWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
| 9 | 19 29 39 49 | 59 69 79 89 99
1-MSE 15-MSE 54-MSE
Chain H from PDB Type:PROTEIN Length:105
aligned with A9CLJ4_AGRFC | A9CLJ4 from UniProtKB/TrEMBL Length:104
Alignment length:105
1
| 9 19 29 39 49 59 69 79 89 99
A9CLJ4_AGRFC - -MIVEERIYRIRGGKMQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHMWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
SCOP domains d1vqyh_ H: automated matches SCOP domains
CATH domains 1vqyH00 H:0-104 [code=3.30.70.900, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeee....eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
1vqy H 0 HmIVEERIYRIRGGKmQEYLKLVREEGIAIQAPILGNLIGYFVTDIGPLSQVIHmWGYASLDDRAERRGKLAEDQRWQAFIPRLSVLIESSENRILLPTDFSPLR 104
| 9 | 19 29 39 49 | 59 69 79 89 99
1-MSE 15-MSE 54-MSE
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |