Chain A from PDB Type:PROTEIN Length:227
aligned with Q5SKI6_THET8 | Q5SKI6 from UniProtKB/TrEMBL Length:228
Alignment length:227
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221
Q5SKI6_THET8 2 RPHRAFSPGLTGVLPLRETRHLVEVLRARVGDRFTVFDGEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEMGEGKLRRLRAVALEAAKQSGRVVVPEVLPPIPLKAVPQVAQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR 228
SCOP domains --d1v6za1 A:4-66 Hypothetical protein TTHA0657 (TT1575) d1v6za2 A:67-228 Hypothetical protein TTHA0657 (TT1575) SCOP domains
CATH domains 1v6zA01 A:2-66 Hypothetical PUA domain-like; domain 1 1v6zA02 A:67-228 [code=3.40.1280.10, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee.hhhh...hhhhhhhhhh........eeeee....eeeeeeee.....eeeeeeee.........eeeeee....hhhhhhhhhhhhh...eeeeee.........hhhhhhhhhhhhhhhhhhh......ee...ee.hhh.....eeee......hhhhhh.....eeeee......hhhhhhhhhhhheeee.......hhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1v6z A 2 RPHRAFSPGLTGVLPLRETRHLVEVLRARVGDRFTVFDGEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEmGEGKLRRLRAVALEAAKQSGRVVVPEVLPPIPLKAVPQVAQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR 228
11 21 31 41 51 61 71 81 91 101 111 | 121 131 141 151 161 171 181 191 201 211 221
113-MSE
Chain A from PDB Type:PROTEIN Length:227
aligned with Q72K73_THET2 | Q72K73 from UniProtKB/TrEMBL Length:228
Alignment length:227
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221
Q72K73_THET2 2 RPHRAFSPGLTGVLPLRETRHLVEVLRARVGDRFTVFDGEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEMGEGKLRRLRAVALEAAKQSGRVRVPEVLPPIPLKAVPQVAQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR 228
SCOP domains --d1v6za1 A:4-66 Hypothetical protein TTHA0657 (TT1575) d1v6za2 A:67-228 Hypothetical protein TTHA0657 (TT1575) SCOP domains
CATH domains 1v6zA01 A:2-66 Hypothetical PUA domain-like; domain 1 1v6zA02 A:67-228 [code=3.40.1280.10, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee.hhhh...hhhhhhhhhh........eeeee....eeeeeeee.....eeeeeeee.........eeeeee....hhhhhhhhhhhhh...eeeeee.........hhhhhhhhhhhhhhhhhhh......ee...ee.hhh.....eeee......hhhhhh.....eeeee......hhhhhhhhhhhheeee.......hhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1v6z A 2 RPHRAFSPGLTGVLPLRETRHLVEVLRARVGDRFTVFDGEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEmGEGKLRRLRAVALEAAKQSGRVVVPEVLPPIPLKAVPQVAQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR 228
11 21 31 41 51 61 71 81 91 101 111 | 121 131 141 151 161 171 181 191 201 211 221
113-MSE
Chain B from PDB Type:PROTEIN Length:225
aligned with Q5SKI6_THET8 | Q5SKI6 from UniProtKB/TrEMBL Length:228
Alignment length:225
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
Q5SKI6_THET8 4 HRAFSPGLTGVLPLRETRHLVEVLRARVGDRFTVFDGEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEMGEGKLRRLRAVALEAAKQSGRVVVPEVLPPIPLKAVPQVAQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR 228
SCOP domains d1v6zb1 B:4-66 Hypothetical protein TTHA0657 (TT1575) d1v6zb2 B:67-228 Hypothetical protein TTHA0657 (TT1575) SCOP domains
CATH domains 1v6zB01 B:4-67 Hypothetical PUA domain-like; domain 1 1v6zB02 B:68-228 [code=3.40.1280.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee........hhhhhhhhhh........eeeee....eeeeeeee.....eeeeeee..........eeeeee....hhhhhhhhhhhhh...eeeeee.........hhhhhhhhhhhhhhhhhhh......ee...ee.hhh.....eeee......hhhhhh.....eeeee......hhhhhhhhhhh.eeee.......hhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1v6z B 4 HRAFSPGLTGVLPLRETRHLVEVLRARVGDRFTVFDGEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEmGEGKLRRLRAVALEAAKQSGRVVVPEVLPPIPLKAVPQVAQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR 228
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
113-MSE
Chain B from PDB Type:PROTEIN Length:225
aligned with Q72K73_THET2 | Q72K73 from UniProtKB/TrEMBL Length:228
Alignment length:225
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
Q72K73_THET2 4 HRAFSPGLTGVLPLRETRHLVEVLRARVGDRFTVFDGEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEMGEGKLRRLRAVALEAAKQSGRVRVPEVLPPIPLKAVPQVAQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR 228
SCOP domains d1v6zb1 B:4-66 Hypothetical protein TTHA0657 (TT1575) d1v6zb2 B:67-228 Hypothetical protein TTHA0657 (TT1575) SCOP domains
CATH domains 1v6zB01 B:4-67 Hypothetical PUA domain-like; domain 1 1v6zB02 B:68-228 [code=3.40.1280.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee........hhhhhhhhhh........eeeee....eeeeeeee.....eeeeeee..........eeeeee....hhhhhhhhhhhhh...eeeeee.........hhhhhhhhhhhhhhhhhhh......ee...ee.hhh.....eeee......hhhhhh.....eeeee......hhhhhhhhhhh.eeee.......hhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1v6z B 4 HRAFSPGLTGVLPLRETRHLVEVLRARVGDRFTVFDGEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEmGEGKLRRLRAVALEAAKQSGRVVVPEVLPPIPLKAVPQVAQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR 228
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
113-MSE
Legend: |
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→ Mismatch |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |