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(-) Description

Title :  PEANUT LECTIN COMPLEXED WITH 10MER PEPTIDE (PVRIWSSATG)
 
Authors :  S. Kundhavai Natchiar, A. Arockia Jeyaprakash, T. N. C. Ramya, C. J. Thomas, K. Suguna, A. Surolia, M. Vijayan
Date :  02 Dec 03  (Deposition) - 10 Feb 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Keywords :  Lectin, Agglutinin, Open Quaternary Association, Monoclinic And Peptide, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. Kundhavai Natchiar, A. Arockia Jeyaprakash, T. N. Ramya, C. J. Thomas, K. Suguna, A. Surolia, M. Vijayan
Structural Plasticity Of Peanut Lectin: An X-Ray Analysis Involving Variation In Ph, Ligand Binding And Crystal Structure.
Acta Crystallogr. , Sect. D V. 60 211 2004
PubMed-ID: 14747696  |  Reference-DOI: 10.1107/S090744490302849X
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GALACTOSE-BINDING LECTIN
    ChainsA, B, C, D, E, F, G, H
    Organism CommonPEANUT
    Organism ScientificARACHIS HYPOGAEA
    Organism Taxid3818
    SynonymAGGLUTININ, PNA
    TissueSEED

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)ABCD    
Biological Unit 2 (1x)    EFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric Unit (2, 16)
No.NameCountTypeFull Name
1CA8Ligand/IonCALCIUM ION
2MN8Ligand/IonMANGANESE (II) ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MN-1Ligand/IonMANGANESE (II) ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MN-1Ligand/IonMANGANESE (II) ION

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:123 , TYR A:125 , ASN A:127 , ASP A:132BINDING SITE FOR RESIDUE CA A 1237
02AC2SOFTWAREASP B:83 , ASP B:123 , TYR B:125 , ASN B:127 , ASP B:132BINDING SITE FOR RESIDUE CA B 2237
03AC3SOFTWAREASP C:123 , TYR C:125 , ASN C:127 , ASP C:132BINDING SITE FOR RESIDUE CA C 3237
04AC4SOFTWAREGLY D:104 , ASP D:123 , TYR D:125 , ASN D:127 , ASP D:132BINDING SITE FOR RESIDUE CA D 4237
05AC5SOFTWAREGLY E:104 , ASP E:123 , TYR E:125 , ASN E:127 , ASP E:132BINDING SITE FOR RESIDUE CA E 5237
06AC6SOFTWAREASP F:123 , TYR F:125 , ASN F:127 , ASP F:132BINDING SITE FOR RESIDUE CA F 6237
07AC7SOFTWAREASP G:123 , TYR G:125 , ASN G:127 , ASP G:132BINDING SITE FOR RESIDUE CA G 7237
08AC8SOFTWAREASP H:123 , TYR H:125 , ASN H:127 , ASP H:132BINDING SITE FOR RESIDUE CA H 8237
09AC9SOFTWAREGLU A:121 , ASP A:123 , ASP A:132 , HIS A:137 , SER A:147BINDING SITE FOR RESIDUE MN A 1238
10BC1SOFTWAREGLU B:121 , ASP B:123 , ASP B:132 , HIS B:137 , SER B:147BINDING SITE FOR RESIDUE MN B 2238
11BC2SOFTWAREGLU C:121 , ASP C:123 , ASP C:132 , HIS C:137BINDING SITE FOR RESIDUE MN C 3238
12BC3SOFTWAREGLU D:121 , ASP D:123 , ASP D:132 , HIS D:137BINDING SITE FOR RESIDUE MN D 4238
13BC4SOFTWAREGLU E:121 , ASP E:123 , ASP E:132 , HIS E:137BINDING SITE FOR RESIDUE MN E 5238
14BC5SOFTWAREGLU F:121 , ASP F:123 , ASP F:132 , HIS F:137 , SER F:147BINDING SITE FOR RESIDUE MN F 6238
15BC6SOFTWAREGLU G:121 , ASP G:123 , ASP G:132 , HIS G:137BINDING SITE FOR RESIDUE MN G 7238
16BC7SOFTWAREGLU H:121 , ASP H:123 , ASP H:132 , HIS H:137BINDING SITE FOR RESIDUE MN H 8238

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1V6O)

(-) Cis Peptide Bonds  (16, 16)

Asymmetric Unit
No.Residues
1Lys A:77 -Asp A:78
2Ala A:82 -Asp A:83
3Lys B:77 -Asp B:78
4Ala B:82 -Asp B:83
5Lys C:77 -Asp C:78
6Ala C:82 -Asp C:83
7Lys D:77 -Asp D:78
8Ala D:82 -Asp D:83
9Lys E:77 -Asp E:78
10Ala E:82 -Asp E:83
11Lys F:77 -Asp F:78
12Ala F:82 -Asp F:83
13Lys G:77 -Asp G:78
14Ala G:82 -Asp G:83
15Lys H:77 -Asp H:78
16Ala H:82 -Asp H:83

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (3, 24)

Asymmetric Unit (3, 24)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_LECG_ARAHY_001 *E115VLECG_ARAHY  ---  ---A/B/C/D/E/F/G/HE92V
2UniProtVAR_LECG_ARAHY_002 *K172ALECG_ARAHY  ---  ---A/B/C/D/E/F/G/HK149A
3UniProtVAR_LECG_ARAHY_003 *K185ILECG_ARAHY  ---  ---A/B/C/D/E/F/G/HK162I
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (3, 12)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_LECG_ARAHY_001 *E115VLECG_ARAHY  ---  ---A/B/C/DE92V
2UniProtVAR_LECG_ARAHY_002 *K172ALECG_ARAHY  ---  ---A/B/C/DK149A
3UniProtVAR_LECG_ARAHY_003 *K185ILECG_ARAHY  ---  ---A/B/C/DK162I
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (3, 12)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_LECG_ARAHY_001 *E115VLECG_ARAHY  ---  ---E/F/G/HE92V
2UniProtVAR_LECG_ARAHY_002 *K172ALECG_ARAHY  ---  ---E/F/G/HK149A
3UniProtVAR_LECG_ARAHY_003 *K185ILECG_ARAHY  ---  ---E/F/G/HK162I
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 16)

Asymmetric Unit (2, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1LECTIN_LEGUME_BETAPS00307 Legume lectins beta-chain signature.LECG_ARAHY141-147
 
 
 
 
 
 
 
  8A:118-124
B:118-124
C:118-124
D:118-124
E:118-124
F:118-124
G:118-124
H:118-124
2LECTIN_LEGUME_ALPHAPS00308 Legume lectins alpha-chain signature.LECG_ARAHY221-230
 
 
 
 
 
 
 
  8A:198-207
B:198-207
C:198-207
D:198-207
E:198-207
F:198-207
G:198-207
H:198-207
Biological Unit 1 (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1LECTIN_LEGUME_BETAPS00307 Legume lectins beta-chain signature.LECG_ARAHY141-147
 
 
 
 
 
 
 
  4A:118-124
B:118-124
C:118-124
D:118-124
-
-
-
-
2LECTIN_LEGUME_ALPHAPS00308 Legume lectins alpha-chain signature.LECG_ARAHY221-230
 
 
 
 
 
 
 
  4A:198-207
B:198-207
C:198-207
D:198-207
-
-
-
-
Biological Unit 2 (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1LECTIN_LEGUME_BETAPS00307 Legume lectins beta-chain signature.LECG_ARAHY141-147
 
 
 
 
 
 
 
  4-
-
-
-
E:118-124
F:118-124
G:118-124
H:118-124
2LECTIN_LEGUME_ALPHAPS00308 Legume lectins alpha-chain signature.LECG_ARAHY221-230
 
 
 
 
 
 
 
  4-
-
-
-
E:198-207
F:198-207
G:198-207
H:198-207

(-) Exons   (0, 0)

(no "Exon" information available for 1V6O)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:232
 aligned with LECG_ARAHY | P02872 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:232
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253  
           LECG_ARAHY    24 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 255
               SCOP domains d1v6oa_ A: Legume lectin                                                                                                                                                                                                                 SCOP domains
               CATH domains 1v6oA00 A:1-232  [code=2.60.120.200, no name defined]                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.........eeeee..ee.....ee.........eeeeee...ee..........eeeeeeeeeee.........eeeeeeee..........hhhhh.......eeeeeeeeee...hhhhh.....eeeeeeee....eeee.......eeeeeeeee....eeeeeee.....eeeeeee.........eeeeeeeee.......eeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------V--------------------------------------------------------A------------I---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v6o A   1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  

Chain B from PDB  Type:PROTEIN  Length:232
 aligned with LECG_ARAHY | P02872 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:232
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253  
           LECG_ARAHY    24 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 255
               SCOP domains d1v6ob_ B: Legume lectin                                                                                                                                                                                                                 SCOP domains
               CATH domains 1v6oB00 B:1-232  [code=2.60.120.200, no name defined]                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.........eeeee..ee.....ee..........eeeee...ee..........eeeeeeeeeee.........eeeeeeee..........hhhhh.......eeeeeeeeee...hhhhh.....eeeeeeee....eeee......eeeeeeeeee....eeeeeee.....eeeeeee.hhhhhh..eeeeeeee........eeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------V--------------------------------------------------------A------------I---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v6o B   1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  

Chain C from PDB  Type:PROTEIN  Length:232
 aligned with LECG_ARAHY | P02872 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:232
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253  
           LECG_ARAHY    24 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 255
               SCOP domains d1v6oc_ C: Legume lectin                                                                                                                                                                                                                 SCOP domains
               CATH domains 1v6oC00 C:1-232  [code=2.60.120.200, no name defined]                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.........eeeee..ee.....ee.........eeeeee...ee..........eeeeeeeeeee.........eeeeeeee..........hhhhh.......eeeeeeeeee...hhhhh.....eeeeeeee....eeee........eeeeeeee....eeeeeee.....eeeeeee.hhhhh...eeeeeeeee.......eeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------V--------------------------------------------------------A------------I---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v6o C   1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  

Chain D from PDB  Type:PROTEIN  Length:232
 aligned with LECG_ARAHY | P02872 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:232
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253  
           LECG_ARAHY    24 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 255
               SCOP domains d1v6od_ D: Legume lectin                                                                                                                                                                                                                 SCOP domains
               CATH domains 1v6oD00 D:1-232  [code=2.60.120.200, no name defined]                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.........eeeee..ee.....ee.........eeeeee...ee..........eeeeeeeeeee.........eeeeeeee..........hhhhh.......eeeeeeeeee...hhhhh.....eeeeeeee....eeee......eeeeeeeeee....eeeeeee.....eeeeeee.hhhhh...eeeeeeeee.......eeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------V--------------------------------------------------------A------------I---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v6o D   1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  

Chain E from PDB  Type:PROTEIN  Length:232
 aligned with LECG_ARAHY | P02872 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:232
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253  
           LECG_ARAHY    24 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 255
               SCOP domains d1v6oe_ E: Legume lectin                                                                                                                                                                                                                 SCOP domains
               CATH domains 1v6oE00 E:1-232  [code=2.60.120.200, no name defined]                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.........eeeee..ee.....ee.........eeeeee...ee..........eeeeeeeeeee.........eeeeeeee..........hhhhh.......eeeeeeeeee...hhhhh.....eeeeeeee....eeee........eeeeeeee....eeeeeee.....eeeeeee.hhhhhh..eeeeeeeee.......eeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------V--------------------------------------------------------A------------I---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v6o E   1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  

Chain F from PDB  Type:PROTEIN  Length:232
 aligned with LECG_ARAHY | P02872 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:232
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253  
           LECG_ARAHY    24 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 255
               SCOP domains d1v6of_ F: Legume lectin                                                                                                                                                                                                                 SCOP domains
               CATH domains 1v6oF00 F:1-232  [code=2.60.120.200, no name defined]                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.........eeeee..ee.....ee.........eeeeee...ee..........eeeeeeeeeee.........eeeeeeee..........hhhhh.......eeeeeeeeee...hhhhh.....eeeeeeee....eeee.......eeeeeeeee....eeeeeee.....eeeeeee.hhhhh...eeeeeeeee.......eeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------V--------------------------------------------------------A------------I---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v6o F   1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  

Chain G from PDB  Type:PROTEIN  Length:232
 aligned with LECG_ARAHY | P02872 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:232
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253  
           LECG_ARAHY    24 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 255
               SCOP domains d1v6og_ G: Legume lectin                                                                                                                                                                                                                 SCOP domains
               CATH domains 1v6oG00 G:1-232  [code=2.60.120.200, no name defined]                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.........eeeee..ee.....ee.........eeeeee...ee..........eeeeeeeeeee.........eeeeeeee..........hhhhh.......eeeeeeeeee...hhhhh.....eeeeeeee....eeee.......eeeeeeeee....eeeeeee.....eeeeeee.hhhhhh..eeeeeeeee.......eeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------V--------------------------------------------------------A------------I---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v6o G   1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  

Chain H from PDB  Type:PROTEIN  Length:232
 aligned with LECG_ARAHY | P02872 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:232
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253  
           LECG_ARAHY    24 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 255
               SCOP domains d1v6oh_ H: Legume lectin                                                                                                                                                                                                                 SCOP domains
               CATH domains 1v6oH00 H:1-232  [code=2.60.120.200, no name defined]                                                                                                                                                                                    CATH domains
           Pfam domains (1) -Lectin_legB-1v6oH01 H:2-226                                                                                                                                                                                                      ------ Pfam domains (1)
           Pfam domains (2) -Lectin_legB-1v6oH02 H:2-226                                                                                                                                                                                                      ------ Pfam domains (2)
           Pfam domains (3) -Lectin_legB-1v6oH03 H:2-226                                                                                                                                                                                                      ------ Pfam domains (3)
           Pfam domains (4) -Lectin_legB-1v6oH04 H:2-226                                                                                                                                                                                                      ------ Pfam domains (4)
           Pfam domains (5) -Lectin_legB-1v6oH05 H:2-226                                                                                                                                                                                                      ------ Pfam domains (5)
           Pfam domains (6) -Lectin_legB-1v6oH06 H:2-226                                                                                                                                                                                                      ------ Pfam domains (6)
           Pfam domains (7) -Lectin_legB-1v6oH07 H:2-226                                                                                                                                                                                                      ------ Pfam domains (7)
           Pfam domains (8) -Lectin_legB-1v6oH08 H:2-226                                                                                                                                                                                                      ------ Pfam domains (8)
         Sec.struct. author .eeeee...........eeeee..ee.....ee.........eeeeee...ee..........eeeeeeeeeee.........eeeeeeee..........hhhhh.......eeeeeeeeee...hhhhh.....eeeeeeee....eeee......eeeeeeeeee....eeeeeee.....eeeeeee.hhhhh...eeeeeeeee.......eeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------V--------------------------------------------------------A------------I---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v6o H   1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 232
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230  

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Class: Mainly Beta (13760)

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Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (LECG_ARAHY | P02872)
molecular function
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        LECG_ARAHY | P028721bzw 1ciw 1cq9 1cr7 1qf3 1rir 1rit 1v6i 1v6j 1v6k 1v6l 1v6m 1v6n 2dh1 2dv9 2dva 2dvb 2dvd 2dvf 2dvg 2pel 2tep

(-) Related Entries Specified in the PDB File

1cr7 CRYSTAL STRUCTURES OF THE PEANUT LECTIN-LACTOSE COMPLEX AT ACIDIC PH
1v6i PEANUT LECTIN-LACTOSE COMPLEX CRYSTALLIZED IN ORTHORHOMBIC FORM AT ACIDIC PH AT 2.15 A
1v6j PEANUT LECTIN-LACTOSE COMPLEX CRYSTALLIZED IN ORTHORHOMBIC FORM AT ACIDIC PH AT 2.90 A
1v6k PEANUT LECTIN-LACTOSE COMPLEX IN THE PRESENCE OF PEPTIDE(IWSSAGNVA) AT 2.40 A
1v6l PEANUT LECTIN-LACTOSE COMPLEX IN THE PRESENCE OF 9MER PEPTIDE (PVIWSSATG) 2.50 A
1v6m PEANUT LECTIN COMPLEX IN THE PRESENCE OF 9MER PEPTIDE (IWSSAGNVA) AT 2.70 A
1v6n PEANUT LECTIN WITH 9MER PEPTIDE (PVIWSSATG) AT 3.50 A