Chain A from PDB Type:PROTEIN Length:135
aligned with SLOA_PROMU | Q6TPH0 from UniProtKB/Swiss-Prot Length:158
Alignment length:135
33 43 53 63 73 83 93 103 113 123 133 143 153
SLOA_PROMU 24 DFDCIPGWSAYDRYCYQAFSEPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENLYKQSSKKCYALKKGTELRTWFNVYCGRENPFVCKYTPEC 158
SCOP domains d1v4la_ A: Snake coagglutinin alpha chain SCOP domains
CATH domains 1v4lA00 A:1-135 Mannose-Binding Protein A, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee..eeeeeeeeeehhhhhhhhhhhh...eee....hhhhhhhhhhhhhh.......eeeeeeee......................hhhhh..eeeee........eee.....eeeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------C_TYPE_LECTIN_2 PDB: A:11-130 UniProt: 34-153 ----- PROSITE (2)
PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) -------------------------------------------------------------------------------------------------------C_TYPE_LECTIN_1 ------ PROSITE (4)
Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
1v4l A 1 DFDCIPGWSAYDRYCYQAFSEPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENLYKQSSKKCYALKKGTELRTWFNVYCGRENPFVCKYTPEC 135
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain B from PDB Type:PROTEIN Length:125
aligned with SLOB_PROMU | Q6TPG9 from UniProtKB/Swiss-Prot Length:148
Alignment length:125
33 43 53 63 73 83 93 103 113 123 133 143
SLOB_PROMU 24 GFCCPLGWSSYDEHCYQVFQQKINWEDAEKFCTQQHRGSHLVSFHSSEEVDFVVSKTSPILKHDFVWMGLSNVWNECAKEWSDGTKLDYKAWSGQSDCITSKTTDNQWLSMDCSSKRYVVCKFQA 148
SCOP domains d1v4lb_ B: Snake coagglutinin beta chain SCOP domains
CATH domains 1v4lB00 B:201-325 Mannose-Binding Protein A, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee..eeeeeeeeeehhhhhhhhhhhhh..eee....hhhhhhhhhhhhh......eee...........eee...............eeeeee.....eeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ----------C_TYPE_LECTIN_2 PDB: B:211-322 UniProt: 34-145 --- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) -------------------------------------------------------------------------------------------------C_TYPE_LECTIN_1 ---- PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
1v4l B 201 GFCCPLGWSSYDEHCYQVFQQKMNWEDAEKFCTQQHRGSHLVSFHSSEEVDFVVSKTSPILKHDFVWMGLSNVWNECAKEWSDGTKLDYKAWSGQSDCITSKTTDNQWLSMDCSSKRYVVCKFQA 325
210 220 230 240 250 260 270 280 290 300 310 320
Chain C from PDB Type:PROTEIN Length:135
aligned with SLOA_PROMU | Q6TPH0 from UniProtKB/Swiss-Prot Length:158
Alignment length:135
33 43 53 63 73 83 93 103 113 123 133 143 153
SLOA_PROMU 24 DFDCIPGWSAYDRYCYQAFSEPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENLYKQSSKKCYALKKGTELRTWFNVYCGRENPFVCKYTPEC 158
SCOP domains d1v4lc_ C: Snake coagglutinin alpha chain SCOP domains
CATH domains 1v4lC00 C:1-135 Mannose-Binding Protein A, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee..eeeeeeeeeehhhhhhhhhhhh...eee....hhhhhhhhhhhhhhhh.....eeeeeeee......................hhhhh..eeeee.......eeee.....eeeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------C_TYPE_LECTIN_2 PDB: C:11-130 UniProt: 34-153 ----- PROSITE (2)
PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) -------------------------------------------------------------------------------------------------------C_TYPE_LECTIN_1 ------ PROSITE (4)
Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
1v4l C 1 DFDCIPGWSAYDRYCYQAFSEPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENLYKQSSKKCYALKKGTELRTWFNVYCGRENPFVCKYTPEC 135
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain D from PDB Type:PROTEIN Length:125
aligned with SLOB_PROMU | Q6TPG9 from UniProtKB/Swiss-Prot Length:148
Alignment length:125
33 43 53 63 73 83 93 103 113 123 133 143
SLOB_PROMU 24 GFCCPLGWSSYDEHCYQVFQQKINWEDAEKFCTQQHRGSHLVSFHSSEEVDFVVSKTSPILKHDFVWMGLSNVWNECAKEWSDGTKLDYKAWSGQSDCITSKTTDNQWLSMDCSSKRYVVCKFQA 148
SCOP domains d1v4ld_ D: Snake coagglutinin beta chain SCOP domains
CATH domains 1v4lD00 D:201-325 Mannose-Binding Protein A, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee..eeeeeeeeeehhhhhhhhhhhhh...ee.....hhhhhhhhhhhh....................eee...............eee..........eee....eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ----------C_TYPE_LECTIN_2 PDB: D:211-322 UniProt: 34-145 --- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) -------------------------------------------------------------------------------------------------C_TYPE_LECTIN_1 ---- PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
1v4l D 201 GFCCPLGWSSYDEHCYQVFQQKMNWEDAEKFCTQQHRGSHLVSFHSSEEVDFVVSKTSPILKHDFVWMGLSNVWNECAKEWSDGTKLDYKAWSGQSDCITSKTTDNQWLSMDCSSKRYVVCKFQA 325
210 220 230 240 250 260 270 280 290 300 310 320
Chain E from PDB Type:PROTEIN Length:135
aligned with SLOA_PROMU | Q6TPH0 from UniProtKB/Swiss-Prot Length:158
Alignment length:135
33 43 53 63 73 83 93 103 113 123 133 143 153
SLOA_PROMU 24 DFDCIPGWSAYDRYCYQAFSEPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENLYKQSSKKCYALKKGTELRTWFNVYCGRENPFVCKYTPEC 158
SCOP domains d1v4le_ E: Snake coagglutinin alpha chain SCOP domains
CATH domains 1v4lE00 E:1-135 Mannose-Binding Protein A, subunit A CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee..eeeeeeeeeeehhhhhhhh......eee....hhhhhhhhhhhhhhhh.....eeeeeeee.............................eeeee.......eeee....eeeeeeee.... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----------C_TYPE_LECTIN_2 PDB: E:11-130 UniProt: 34-153 ----- PROSITE (2)
PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) -------------------------------------------------------------------------------------------------------C_TYPE_LECTIN_1 ------ PROSITE (4)
Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
1v4l E 1 DFDCIPGWSAYDRYCYQAFSEPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENLYKQSSKKCYALKKGTELRTWFNVYCGRENPFVCKYTPEC 135
10 20 30 40 50 60 70 80 90 100 110 120 130
Chain F from PDB Type:PROTEIN Length:125
aligned with SLOB_PROMU | Q6TPG9 from UniProtKB/Swiss-Prot Length:148
Alignment length:125
33 43 53 63 73 83 93 103 113 123 133 143
SLOB_PROMU 24 GFCCPLGWSSYDEHCYQVFQQKINWEDAEKFCTQQHRGSHLVSFHSSEEVDFVVSKTSPILKHDFVWMGLSNVWNECAKEWSDGTKLDYKAWSGQSDCITSKTTDNQWLSMDCSSKRYVVCKFQA 148
SCOP domains d1v4lf_ F: Snake coagglutinin beta chain SCOP domains
CATH domains 1v4lF00 F:201-325 Mannose-Binding Protein A, subunit A CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee..eeeeeeeeeehhhhhhhhhhhhh...ee....hhhhhhhhhhhhh......eee...........eee...............eeeeee.....eeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ----------C_TYPE_LECTIN_2 PDB: F:211-322 UniProt: 34-145 --- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) -------------------------------------------------------------------------------------------------C_TYPE_LECTIN_1 ---- PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
1v4l F 201 GFCCPLGWSSYDEHCYQVFQQKMNWEDAEKFCTQQHRGSHLVSFHSSEEVDFVVSKTSPILKHDFVWMGLSNVWNECAKEWSDGTKLDYKAWSGQSDCITSKTTDNQWLSMDCSSKRYVVCKFQA 325
210 220 230 240 250 260 270 280 290 300 310 320
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |