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(-) Description

Title :  GLUTATHIONE S-TRANSFERASE 1-6 FROM ANOPHELES DIRUS SPECIES B
 
Authors :  A. J. Oakley
Date :  10 Oct 03  (Deposition) - 28 Oct 03  (Release) - 20 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  A (1x),B (1x),C (1x),D (1x)
Keywords :  Glutathione S-Transferase, Detoxification, Glutathione, Xenobiotics, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Udomsinprasert, S. Pongjaroenkit, J. Wongsantichon, A. J. Oakley L. A. Prapanthadara, M. C. Wilce, A. J. Ketterman
Identification, Characterization And Structure Of A New Delta Class Glutathione Transferase Isoenzyme.
Biochem. J. V. 388 763 2005
PubMed-ID: 15717864  |  Reference-DOI: 10.1042/BJ20042015

(-) Compounds

Molecule 1 - GLUTATHIONE TRANSFERASE GST1-6
    Chains: A, B, C, D
    EC Number: 2.5.1.18
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ADGST1-6
    Organism Scientific: ANOPHELES DIRUS
    Organism Taxid: 7168
    Synonym: GLUTATHIONE S-TRANSFERASE 1-6

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD
Biological Unit 3 (1x): A (1x)B (1x)C (1x)D (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1GTS4Ligand/IonGLUTATHIONE SULFONIC ACID
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1GTS2Ligand/IonGLUTATHIONE SULFONIC ACID
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1GTS2Ligand/IonGLUTATHIONE SULFONIC ACID
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1GTS2Ligand/IonGLUTATHIONE SULFONIC ACID

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:9 , PRO A:11 , HIS A:49 , THR A:50 , ILE A:51 , PRO A:52 , GLU A:63 , SER A:64 , TYR A:65 , HOH A:1104 , HOH A:1129BINDING SITE FOR RESIDUE GTS A 1001
2AC2SOFTWARESER B:9 , PRO B:11 , VAL B:33 , HIS B:49 , THR B:50 , ILE B:51 , PRO B:52 , GLU B:63 , SER B:64 , TYR B:65 , HOH B:2126BINDING SITE FOR RESIDUE GTS B 2001
3AC3SOFTWARESER C:9 , PRO C:11 , VAL C:33 , HIS C:49 , THR C:50 , ILE C:51 , PRO C:52 , GLU C:63 , SER C:64 , TYR C:65 , HOH C:3140 , HOH C:3143BINDING SITE FOR RESIDUE GTS C 3001
4AC4SOFTWARESER D:9 , PRO D:11 , VAL D:33 , HIS D:49 , THR D:50 , ILE D:51 , PRO D:52 , GLU D:63 , SER D:64 , HOH D:4102 , HOH D:4117 , HOH D:4124 , HOH D:4144 , HOH D:4158BINDING SITE FOR RESIDUE GTS D 4001

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1V2A)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Ile A:51 -Pro A:52
2Ile B:51 -Pro B:52
3Ile C:51 -Pro C:52
4Ile D:51 -Pro D:52

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1V2A)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1V2A)

(-) Exons   (0, 0)

(no "Exon" information available for 1V2A)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:208
 aligned with Q9BHB0_9DIPT | Q9BHB0 from UniProtKB/TrEMBL  Length:210

    Alignment length:208
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200        
         Q9BHB0_9DIPT     1 MDYYYSLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETYAKDDTLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWLKHDLEPFPHIRAWLERVRAEMPDYEEFSKQVADDTLAYVAS 208
               SCOP domains d1v2aa2 A:1-83 Class delta GST                                                     d1v2aa1 A:84-208 Class delta GST                                                                                              SCOP domains
               CATH domains 1v2aA01 A:1-76 Glutaredoxin                                                 1v2aA02 A:77-208  [code=1.20.1050.10, no name defined]                                                                               CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee...hhhhhhhhhhhhhhh...eeee....hhhhhhhhhhhh......eeee..eeeehhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v2a A   1 MDYYYSLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETYAKDDTLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWLKHDLEPFPHIRAWLERVRAEMPDYEEFSKQVADDTLAYVAS 208
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200        


Chain B from PDB  Type:PROTEIN  Length:209
 aligned with Q9BHB0_9DIPT | Q9BHB0 from UniProtKB/TrEMBL  Length:210

    Alignment length:209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200         
         Q9BHB0_9DIPT     1 MDYYYSLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETYAKDDTLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWLKHDLEPFPHIRAWLERVRAEMPDYEEFSKQVADDTLAYVASR 209
               SCOP domains d1v2ab2 B:1-83 Class delta GST                                                     d1v2ab1 B:84-208 Class delta GST                                                                                             - SCOP domains
               CATH domains 1v2aB01 B:1-76 Glutaredoxin                                                 1v2aB02 B:77-208  [code=1.20.1050.10, no name defined]                                                                              - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......hhhhhhhhhhhh...eeee....hhhhhhhhhhhh......eeee..eeeehhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v2a B   1 MDYYYSLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETYAKDDTLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWLKHDLEPFPHIRAWLERVRAEMPDYEEFSKQVADDTLAYVASR 209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200         


Chain C from PDB  Type:PROTEIN  Length:208
 aligned with Q9BHB0_9DIPT | Q9BHB0 from UniProtKB/TrEMBL  Length:210

    Alignment length:208
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200        
         Q9BHB0_9DIPT     1 MDYYYSLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETYAKDDTLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWLKHDLEPFPHIRAWLERVRAEMPDYEEFSKQVADDTLAYVAS 208
               SCOP domains d1v2ac2 C:1-83 Class delta GST                                                     d1v2ac1 C:84-205 Class delta GST                                                                                          --- SCOP domains
               CATH domains 1v2aC01 C:1-76 Glutaredoxin                                                 1v2aC02 C:77-205  [code=1.20.1050.10, no name defined]                                                                           --- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee...hhhhhhhhhhhhhhh...eeee....hhhhhhhhhh........eeee..eeeehhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v2a C   1 MDYYYSLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETYAKDDTLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWLKHDLEPFPHIRAWLERVRAEMPDYEEFSKQVADDTLAYVAS 208
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200        


Chain D from PDB  Type:PROTEIN  Length:208
 aligned with Q9BHB0_9DIPT | Q9BHB0 from UniProtKB/TrEMBL  Length:210

    Alignment length:208
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200        
         Q9BHB0_9DIPT     1 MDYYYSLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETYAKDDTLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWLKHDLEPFPHIRAWLERVRAEMPDYEEFSKQVADDTLAYVAS 208
               SCOP domains d1v2ad2 D:1-83 Class delta GST                                                     d1v2ad1 D:84-208 Class delta GST                                                                                              SCOP domains
               CATH domains 1v2aD01 D:1-76 Glutaredoxin                                                 1v2aD02 D:77-208  [code=1.20.1050.10, no name defined]                                                                               CATH domains
           Pfam domains (1) ---GST_N_3-1v2aD05 D:4-84                                                           -----------------GST_C_2-1v2aD01 D:102-183                                                         ------------------------- Pfam domains (1)
           Pfam domains (2) ---GST_N_3-1v2aD06 D:4-84                                                           -----------------GST_C_2-1v2aD02 D:102-183                                                         ------------------------- Pfam domains (2)
           Pfam domains (3) ---GST_N_3-1v2aD07 D:4-84                                                           -----------------GST_C_2-1v2aD03 D:102-183                                                         ------------------------- Pfam domains (3)
           Pfam domains (4) ---GST_N_3-1v2aD08 D:4-84                                                           -----------------GST_C_2-1v2aD04 D:102-183                                                         ------------------------- Pfam domains (4)
         Sec.struct. author .eeee...hhhhhhhhhhhhhhh...eeee....hhhhhhhhhh........eeee..eeeehhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1v2a D   1 MDYYYSLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETYAKDDTLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVTERAYAAADHLTVADICLLGTVTALNWLKHDLEPFPHIRAWLERVRAEMPDYEEFSKQVADDTLAYVAS 208
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (2, 8)

Asymmetric Unit
(-)
Clan: GST_C (118)
(-)
Family: GST_C_2 (16)
(-)
Anopheles dirus (2)
1aGST_C_2-1v2aD01D:102-183
1bGST_C_2-1v2aD02D:102-183
1cGST_C_2-1v2aD03D:102-183
1dGST_C_2-1v2aD04D:102-183
(-)
Clan: Thioredoxin (367)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q9BHB0_9DIPT | Q9BHB0)
molecular function
    GO:0004364    glutathione transferase activity    Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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  1v2a
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1jlv ANOPHELES DIRUS SPECIES B GLUTATHIONE S-TRANSFERASES 1-3
1jlw ANOPHELES DIRUS SPECIES B GLUTATHIONE S-TRANSFERASES 1-4
1r5a GLUTATHIONE S-TRANSFERASE 1-5 COMPLEXED WITH GTS AND COPPER ION