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(-) Description

Title :  MEPA, ACTIVE FORM WITH ZN IN P1
 
Authors :  M. Marcyjaniak, S. G. Odintsov, I. Sabala, M. Bochtler
Date :  14 Jul 04  (Deposition) - 07 Sep 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Keywords :  Las Enzyme, Metallopeptidase, Peptidoglycan Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Marcyjaniak, S. G. Odintsov, I. Sabala, M. Bochtler
Peptidoglycan Amidase Mepa Is A Las Metallopeptidase
J. Biol. Chem. V. 279 43982 2004
PubMed-ID: 15292190  |  Reference-DOI: 10.1074/JBC.M406735200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PENICILLIN-INSENSITIVE MUREIN ENDOPEPTIDASE
    Chains: A, B, C, D, E, F
    EC Number: 3.4.99.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MEPA
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: D-ALANYL-D-ALANINE-ENDOPEPTIDASE, DD- ENDOPEPTIDASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 51)

Asymmetric Unit (3, 51)
No.NameCountTypeFull Name
1MSE36Mod. Amino AcidSELENOMETHIONINE
2SO46Ligand/IonSULFATE ION
3ZN9Ligand/IonZINC ION
Biological Unit 1 (2, 14)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
2SO42Ligand/IonSULFATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 2 (2, 14)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
2SO42Ligand/IonSULFATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 3 (2, 14)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
2SO42Ligand/IonSULFATE ION
3ZN-1Ligand/IonZINC ION

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:110 , HIS A:113 , ASP A:120 , HIS A:211BINDING SITE FOR RESIDUE ZN A 400
02AC2SOFTWAREGLN A:205 , HIS A:206 , ARG A:207 , ALA A:208 , HIS A:209BINDING SITE FOR RESIDUE SO4 A 500
03AC3SOFTWAREHIS B:110 , HIS B:113 , ASP B:120 , HIS B:211BINDING SITE FOR RESIDUE ZN B 400
04AC4SOFTWAREGLN B:205 , HIS B:206 , ARG B:207 , ALA B:208 , HIS B:209BINDING SITE FOR RESIDUE SO4 B 501
05AC5SOFTWAREHIS C:110 , HIS C:113 , ASP C:120 , HIS C:211BINDING SITE FOR RESIDUE ZN C 400
06AC6SOFTWAREGLN C:205 , HIS C:206 , ARG C:207 , ALA C:208 , HIS C:209BINDING SITE FOR RESIDUE SO4 C 502
07AC7SOFTWAREHIS D:110 , HIS D:113 , ASP D:120 , HIS D:211BINDING SITE FOR RESIDUE ZN D 400
08AC8SOFTWAREHIS D:206 , ARG D:207 , ALA D:208 , HIS D:209BINDING SITE FOR RESIDUE SO4 D 503
09AC9SOFTWAREHIS E:110 , HIS E:113 , ASP E:120 , HIS E:211BINDING SITE FOR RESIDUE ZN E 400
10BC1SOFTWAREGLN E:205 , HIS E:206 , ARG E:207 , ALA E:208 , HIS E:209BINDING SITE FOR RESIDUE SO4 E 504
11BC2SOFTWAREHIS F:110 , HIS F:113 , ASP F:120 , HIS F:211BINDING SITE FOR RESIDUE ZN F 400
12BC3SOFTWAREHIS F:206 , ARG F:207 , ALA F:208 , HIS F:209BINDING SITE FOR RESIDUE SO4 F 505
13BC4SOFTWAREASP A:147 , HIS A:150 , ASP B:147 , HIS B:150BINDING SITE FOR RESIDUE ZN A 601
14BC5SOFTWAREASP C:147 , HIS C:150 , ASP D:147 , HIS D:150BINDING SITE FOR RESIDUE ZN D 602
15BC6SOFTWAREASP E:147 , HIS E:150 , ASP F:147 , HIS F:150BINDING SITE FOR RESIDUE ZN E 603

(-) SS Bonds  (18, 18)

Asymmetric Unit
No.Residues
1A:44 -A:265
2A:187 -A:235
3A:216 -A:223
4B:44 -B:265
5B:187 -B:235
6B:216 -B:223
7C:44 -C:265
8C:187 -C:235
9C:216 -C:223
10D:44 -D:265
11D:187 -D:235
12D:216 -D:223
13E:44 -E:265
14E:187 -E:235
15E:216 -E:223
16F:44 -F:265
17F:187 -F:235
18F:216 -F:223

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1U10)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1U10)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1U10)

(-) Exons   (0, 0)

(no "Exon" information available for 1U10)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:232
 aligned with MEPA_ECOLI | P0C0T5 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:251
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269 
           MEPA_ECOLI    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLD 270
               SCOP domains d1u10a_ A: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                            SCOP domains
               CATH domains 1u10A00 A:20-270  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                      CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee..........---.........eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhh...hhhhh.eee......eeeeee.....................hhhhhhh..----------------.hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 A  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGR---GHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE----------------LPPSCQALLD 270
                                    29        39        49        59 |      69      | 79        89|       99|    | 109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -         - |     269 
                                                                    61-MSE         76-MSE        90-MSE  98-MSE105 109                                                                                                  210-MSE                           244              261         
                                                                                                          100-MSE                                                                                                                                                                      


Chain A from PDB  Type:PROTEIN  Length:232
 aligned with MEPA_SHIFL | P0C0T6 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:251
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269 
           MEPA_SHIFL    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLD 270
               SCOP domains d1u10a_ A: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                            SCOP domains
               CATH domains 1u10A00 A:20-270  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                      CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee..........---.........eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhh...hhhhh.eee......eeeeee.....................hhhhhhh..----------------.hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 A  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGR---GHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE----------------LPPSCQALLD 270
                                    29        39        49        59 |      69      | 79        89|       99|    | 109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -         - |     269 
                                                                    61-MSE         76-MSE        90-MSE  98-MSE105 109                                                                                                  210-MSE                           244              261         
                                                                                                          100-MSE                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:239
 aligned with MEPA_ECOLI | P0C0T5 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_ECOLI    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10b_ B: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10B00 B:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.........eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhh...hhhhh.eee......eeeeee.....................hhhhhhhh.----------------.hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 B  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE----------------LPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -         - |     269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244              261             
                                                                                                          100-MSE                                                                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:239
 aligned with MEPA_SHIFL | P0C0T6 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_SHIFL    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10b_ B: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10B00 B:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.........eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhh...hhhhh.eee......eeeeee.....................hhhhhhhh.----------------.hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 B  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE----------------LPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -         - |     269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244              261             
                                                                                                          100-MSE                                                                                                                                                                          


Chain C from PDB  Type:PROTEIN  Length:241
 aligned with MEPA_ECOLI | P0C0T5 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_ECOLI    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10c_ C: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10C00 C:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh..hhhhh.eee......eeeeee.....................hhhhhhh..--------------...hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 C  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE--------------PPLPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -       259       269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244            259               
                                                                                                          100-MSE                                                                                                                                                                          


Chain C from PDB  Type:PROTEIN  Length:241
 aligned with MEPA_SHIFL | P0C0T6 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_SHIFL    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10c_ C: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10C00 C:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh..hhhhh.eee......eeeeee.....................hhhhhhh..--------------...hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 C  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE--------------PPLPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -       259       269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244            259               
                                                                                                          100-MSE                                                                                                                                                                          


Chain D from PDB  Type:PROTEIN  Length:241
 aligned with MEPA_ECOLI | P0C0T5 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_ECOLI    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10d_ D: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10D00 D:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.........eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh...hhhh.eee......eeeeee.....................hhhhhhh..--------------...hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 D  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE--------------PPLPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -       259       269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244            259               
                                                                                                          100-MSE                                                                                                                                                                          


Chain D from PDB  Type:PROTEIN  Length:241
 aligned with MEPA_SHIFL | P0C0T6 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_SHIFL    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10d_ D: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10D00 D:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.........eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh...hhhh.eee......eeeeee.....................hhhhhhh..--------------...hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 D  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE--------------PPLPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -       259       269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244            259               
                                                                                                          100-MSE                                                                                                                                                                          


Chain E from PDB  Type:PROTEIN  Length:241
 aligned with MEPA_ECOLI | P0C0T5 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_ECOLI    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10e_ E: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10E00 E:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.........eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh..hhhhh.eee......eeeeee.....................hhhhhhh..--------------...hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 E  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE--------------PPLPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -       259       269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244            259               
                                                                                                          100-MSE                                                                                                                                                                          


Chain E from PDB  Type:PROTEIN  Length:241
 aligned with MEPA_SHIFL | P0C0T6 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_SHIFL    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10e_ E: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10E00 E:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.........eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhh..hhhhh.eee......eeeeee.....................hhhhhhh..--------------...hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 E  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE--------------PPLPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -       259       269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244            259               
                                                                                                          100-MSE                                                                                                                                                                          


Chain F from PDB  Type:PROTEIN  Length:240
 aligned with MEPA_ECOLI | P0C0T5 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_ECOLI    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10f_ F: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10F00 F:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
           Pfam domains (1) ---------------Peptidase_M74-1u10F01 F:35-274                                                                                                                                                                                                                   Pfam domains (1)
           Pfam domains (2) ---------------Peptidase_M74-1u10F02 F:35-274                                                                                                                                                                                                                   Pfam domains (2)
           Pfam domains (3) ---------------Peptidase_M74-1u10F03 F:35-274                                                                                                                                                                                                                   Pfam domains (3)
           Pfam domains (4) ---------------Peptidase_M74-1u10F04 F:35-274                                                                                                                                                                                                                   Pfam domains (4)
           Pfam domains (5) ---------------Peptidase_M74-1u10F05 F:35-274                                                                                                                                                                                                                   Pfam domains (5)
           Pfam domains (6) ---------------Peptidase_M74-1u10F06 F:35-274                                                                                                                                                                                                                   Pfam domains (6)
         Sec.struct. author ...............eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhh..hhhhh.eee......eeeeee.....................hhhhhhhhh---------------..hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 F  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE---------------PLPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -         -|      269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244             260              
                                                                                                          100-MSE                                                                                                                                                                          


Chain F from PDB  Type:PROTEIN  Length:240
 aligned with MEPA_SHIFL | P0C0T6 from UniProtKB/Swiss-Prot  Length:274

    Alignment length:255
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269     
           MEPA_SHIFL    20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI 274
               SCOP domains d1u10f_ F: D-alanyl-D-alanine-endopeptidase MepA                                                                                                                                                                                                                SCOP domains
               CATH domains 1u10F00 F:20-274  [code=3.30.1380.10, no name defined]                                                                                                                                                                                                          CATH domains
           Pfam domains (1) ---------------Peptidase_M74-1u10F01 F:35-274                                                                                                                                                                                                                   Pfam domains (1)
           Pfam domains (2) ---------------Peptidase_M74-1u10F02 F:35-274                                                                                                                                                                                                                   Pfam domains (2)
           Pfam domains (3) ---------------Peptidase_M74-1u10F03 F:35-274                                                                                                                                                                                                                   Pfam domains (3)
           Pfam domains (4) ---------------Peptidase_M74-1u10F04 F:35-274                                                                                                                                                                                                                   Pfam domains (4)
           Pfam domains (5) ---------------Peptidase_M74-1u10F05 F:35-274                                                                                                                                                                                                                   Pfam domains (5)
           Pfam domains (6) ---------------Peptidase_M74-1u10F06 F:35-274                                                                                                                                                                                                                   Pfam domains (6)
         Sec.struct. author ...............eeeee..eeeee..ee.......eee.hhhhh..eehhhhhhhhhhhhhhhhhh....eee......................eeeee........hhhhhhh...................hhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhh..hhhhh.eee......eeeeee.....................hhhhhhhhh---------------..hhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1u10 F  20 ATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVmRTDQRRYFGHPDLVmFIQRLSSQVSNLGmGTVLIGDmGmPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHmHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFE---------------PLPPSCQALLDEHVI 274
                                    29        39        49        59 |      69      | 79        89|       99|      109       119       129       139       149       159       169       179       189       199       209|      219       229       239    |    -         -|      269     
                                                                    61-MSE         76-MSE        90-MSE  98-MSE                                                                                                         210-MSE                           244             260              
                                                                                                          100-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 6)

Asymmetric Unit
(-)
Clan: Peptidase_MD (20)

(-) Gene Ontology  (13, 23)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (MEPA_ECOLI | P0C0T5)
molecular function
    GO:0004175    endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004222    metalloendopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
    GO:0008237    metallopeptidase activity    Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
    GO:0009252    peptidoglycan biosynthetic process    The chemical reactions and pathways resulting in the formation of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.
    GO:0000270    peptidoglycan metabolic process    The chemical reactions and pathways involving peptidoglycans, any of a class of glycoconjugates found only in bacterial cell walls and consisting of strands of glycosaminoglycan cross-linked by oligopeptides to form a huge and rigid network.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
    GO:0042493    response to drug    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
cellular component
    GO:0030288    outer membrane-bounded periplasmic space    The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.
    GO:0042597    periplasmic space    The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

Chain A,B,C,D,E,F   (MEPA_SHIFL | P0C0T6)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004222    metalloendopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
    GO:0008237    metallopeptidase activity    Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
    GO:0000270    peptidoglycan metabolic process    The chemical reactions and pathways involving peptidoglycans, any of a class of glycoconjugates found only in bacterial cell walls and consisting of strands of glycosaminoglycan cross-linked by oligopeptides to form a huge and rigid network.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
    GO:0030288    outer membrane-bounded periplasmic space    The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.
    GO:0042597    periplasmic space    The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MEPA_ECOLI | P0C0T5: 1tzp
        MEPA_SHIFL | P0C0T6: 1tzp

(-) Related Entries Specified in the PDB File

1tzp MEPA, INACTIVE FORM WITHOUT ZN