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(-) Description

Title :  2.0 A CRYSTAL STRUCTURE OF A YYCE PROTEIN OF UNKNOWN FUNCTION FROM BACILLUS SUBTILIS, PUTATIVE GLYOXALASE/FOSFOMYCIN RESISTANCE PROTEIN
 
Authors :  R. Zhang, P. Quartey, F. Collart, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  01 Jul 04  (Deposition) - 17 Aug 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Structural Genomics, Protein Structure Initiative, Mcsg, Duplication Of The Alpha-Beta Sandwichs. Bacillus Subtilis, Psi, Midwest Center For Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Zhang, P. Quartey, F. Collart, A. Joachimiak
2. 0 A Crystal Structure Of A Hypothetical Protein Yyce From Bacillus Subtilis
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN YYCE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PDM68
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: YYCE OR BSU40430
    Organism Scientific: BACILLUS SUBTILIS
    Organism Taxid: 1423
    Strain: 168

 Structural Features

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  1
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Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

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(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Leu A:54 -Pro A:55

 Sequence-Structure Mapping

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(-) PROSITE Motifs  (1, 1)

Asymmetric Unit (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1VOCPS51819 Vicinal oxygen chelate (VOC) domain profile.YYCE_BACSU9-133  1A:9-133
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1VOCPS51819 Vicinal oxygen chelate (VOC) domain profile.YYCE_BACSU9-133  2A:9-133

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:137
 aligned with YYCE_BACSU | P37479 from UniProtKB/Swiss-Prot  Length:139

    Alignment length:137
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       
           YYCE_BACSU     3 KRFSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKGISGK 139
               SCOP domains d1twua_ A: Hypothetical protein YycE                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------Glyoxalase-1twuA01 A:12-130                                                                                            --------- Pfam domains
         Sec.struct. author ..........eeeeee..hhhhhhhhhh......eeeeeeee..eeeeeee.....eeeeeeee.............eeeee..hhhhhhhhhhhhhhh...ee...hhhhhh.eeeee.....eeeee........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------VOC  PDB: A:9-133 UniProt: 9-133                                                                                             ------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1twu A   3 KRFSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKGISGK 139
                                    12        22        32        42        52        62        72        82        92       102       112       122       132
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
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Class: Alpha and beta proteins (a+b) (23004)

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(-) Pfam Domains  (1, 1)

Asymmetric Unit
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Clan: Glyoxalase (58)

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    Leu A:54 - Pro A:55   [ RasMol ]  
 
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