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Asym./Biol. Unit (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF PUTATIVE PHOSPHOMANNOMUTASE FROM THERMUS THERMOPHILUS HB8

Authors :   S. Misaki, S. Suzuki, S. Fujimoto, M. Sakurai, M. Kobayashi, K. Nishijima, N. Kunishima, M. Sugawara, C. Kuroishi, Riken Structural Genomics/Proteomics Initiative (Rsgi)

Date :   25 Jun 04 (Deposition) - 09 Aug 05 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.70

Chains :   Asym./Biol. Unit : A

Keywords :   Phosphomannomutase, Thermus Thermophilus Hb8, Biosynthesis Of Alginate, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Misaki, S. Suzuki, S. Fujimoto, M. Sakurai, M. Kobayashi, K. Nishijima, N. Kunishima, M. Sugawara, C. Kuroishi
Crystal Structure Of Putative Phosphomannomutase From Thermus Thermophilus Hb8
To Be Published
PubMed: search
(for further references see the PDB file header)

Molecule 1 - PUTATIVE PHOSPHOMANNOMUTASE
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PETIIA
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Organism Scientific	:	THERMUS THERMOPHILUS
	Organism Taxid	:	274

		1
Asymmetric/Biological Unit	:	A

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 1TUO)

(no "Site" information available for 1TUO)

(no "SS Bond" information available for 1TUO)

Asymmetric/Biological Unit

No.	Residues
1	Pro A:241	-	Pro A:242

(no "SAP(SNP)/Variant" information available for 1TUO)

(no "PROSITE Motif" information available for 1TUO)

(no "Exon" information available for 1TUO)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:437
 aligned with Q5SKJ3_THET8 | Q5SKJ3 from UniProtKB/TrEMBL  Length:457

    Alignment length:457
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       
         Q5SKJ3_THET8     1 MSAPIRFGTEGFRGVIAREFTFATLHRLAEAYGRHLLERGGGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLLKGPVPTPLLSFAVRHLKAAGGAMLTASHNPPQYLGVKFKDATGGPIAQEEAKAIEALVPEEARALEGAYETLDLREAYFEALKAHLDLKALSGFSGVLYHDSMGGAGAGFLKGFLRHVGLEIPVRPIREEPHPLFHGVNPEPIPKNLGVTLAVLGPETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRFRKGHRGRAVKNFAVTWLLDRLGERLGFGVTTTPVGFKWIKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGKDLAEQFKEVEALTGLTHAYDRLDLPLKAPLDLTPFREPRPLAGLTPKGVDTLDGVKWLYEEAWVLFRASGTEPVVRIYVEAQSPELVRALLEEARKLVEG 457
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1tuoA01 A:8-155 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3                                                                               ----------------------1tuoA02 A:178-262 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3              1tuoA03 A:263-379 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3                                              1tuoA04                A:380-464 Major birch pollen al     lergen Bet v 1             CATH domains
           Pfam domains (1) ---PGM_PMM_I-1tuoA04 A:11-146                                                                                                              -----------PGM_PMM_II-1tuoA02 A:158-262                                                                             ---PGM_PMM_III-1tuoA01 A:266-376                                                                                  ---------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGM_PMM_IV-1tuoA03 A:358-463                                                                              - Pfam domains (2)
         Sec.struct. author ...........eeee.....hhhhhhhhhhhhhhhhhhh...eeeeee....hhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhh...eeeee........eeeeeeee...ee.hhhhhhhhhhh............eee.hhhhhhhhhhh..hhhhhh.....eeee.......hhhhhhhhhh.....eeee......hhhhh....hhhhhhhhhhhhh......eeeee......eeeee...eeehhhhhhhhhhhhhhhh....eeeee....hhhhhhhhhhh..eeee..hhhhhhhhhh...eeeee.....eee...eeeehhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh...eeeee.---------------.......eeeee....eeeee..eeeeee..-----.eeeeee.hhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1tuo A   8 MSAPIRFGTEGFRGVIAREFTFATLHRLAEAYGRHLLERGGGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLLKGPVPTPLLSFAVRHLKAAGGAMLTASHNPPQYLGVKFKDATGGPIAQEEAKAIEALVPEEARALEGAYETLDLREAYFEALKAHLDLKALSGFSGVLYHDSMGGAGAGFLKGFLRHVGLEIPVRPIREEPHPLFHGVNPEPIPKNLGVTLAVLGPETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRFRKGHRGRAVKNFAVTWLLDRLGERLGFGVTTTPVGFKWIKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGKDLAEQFKEVEALTGLTHAYDRLD---------------RPLAGLTPKGVDTLDGVKWLYEEAWVLFRAS-----VRIYVEAQSPELVRALLEEARKLVEG 464
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387         -     | 407       417       427     |   - |     447       457       
                                                                                                                                                                                                                                                                                                                                                                                                                     387             403                           433   439

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 1TUO)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (Q5SKJ3_THET8 | Q5SKJ3)

molecular function
	GO:0016868	intramolecular transferase activity, phosphotransferases	Catalysis of the transfer of a phosphate group from one position to another within a single molecule.
biological process
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0071704	organic substance metabolic process	The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
		Pro A:241 - Pro A:242	[ RasMol ]

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