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(-) Description

Title :  THERMUS THERMOPHILUS GROEL (HSP60 CLASS) FRAGMENT (APICAL DOMAIN) COMPRISING RESIDUES 192-336
 
Authors :  M. A. Walsh, I. Dementieva, G. Evans, R. Sanishvili, A. Joachimiak
Date :  02 Mar 99  (Deposition) - 12 Mar 99  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Chaperone, Hsp60, Groel, Cell Division, Atp-Binding, Phosphorylation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. A. Walsh, I. Dementieva, G. Evans, R. Sanishvili, A. Joachimiak
Taking Mad To The Extreme: Ultrafast Protein Structure Determination.
Acta Crystallogr. , Sect. D V. 55 1168 1999
PubMed-ID: 10329779  |  Reference-DOI: 10.1107/S0907444999003698
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN (GROEL (HSP60 CLASS))
    Cellular Location: CYTOPLASM
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: APICAL DOMAIN, RESIDUES 191 - 376
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 274
    Synonym: 60 KD CHAPERONIN, PROTEIN CPN60

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:145
 aligned with CH60_THETH | P61491 from UniProtKB/Swiss-Prot  Length:145

    Alignment length:145
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140     
           CH60_THETH     1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGK 145
               SCOP domains d1srva_ A: GroEL, A domain                                                                                                                        SCOP domains
               CATH domains 1srvA00 A:192-336 GroEL                                                                                                                           CATH domains
               Pfam domains Cpn60_TCP1-1srvA01 A:192-336                                                                                                                      Pfam domains
         Sec.struct. author .eee......hhh........eeee.eeeee.......hhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhh............hhh..hhh.eee.eeee....eeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1srv A 192 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGK 336
                                   201       211       221       231       241       251       261       271       281       291       301       311       321       331
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: Cpn60_TCP1] (28)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (CH60_THETH | P61491)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  1srv
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