Chain A from PDB Type:PROTEIN Length:224
aligned with CHTA_VIBCH | P01555 from UniProtKB/Swiss-Prot Length:258
Alignment length:235
28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248
CHTA_VIBCH 19 NDDKLYRADSRPPDEIKQSGGLMPRGQSEYFDRGTQMNINLYDHARGTQTGFVRHDDGYVSTSISLRSAHLVGQTILSGHSTYYIYVIATAPNMFNVNDVLGAYSPHPDEQEVSALGGIPYSQIYGWYRVHFGVLDEQLHRNRGYRDRYYSNLDIAPAADGYGLAGFPPEHRAWREEPWIHHAPPGCGNAPRSSMSNTCDEKTQSLGVKFLDEYQSKVKRQIFSGYQSDIDTHNR 253
SCOP domains d1s5fa_ A: Cholera toxin SCOP domains
CATH domains 1s5fA00 A:1-235 Heat-Labile Ente rotoxin, subunit A CATH domains
Pfam domains Enterotoxin_a-1s5fA01 A:1-235 Pfam domains
Sec.struct. author ...eeeeee..hhhhhhhhhee..........---....hhhhhhhh...........eeee..hhhhhhhhhhhhh....eeeeeeee....eeehhhhhhhhh.hhhhh.eeee..ee...eeeeeeee..eeeeeeee....hhhhhh.....hhhhhhhhh.....hhhhhh.hhhhh.......--------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1s5f A 1 NDDKLYRADSRPPDEIKQSGGLMPRGQSEYFD---QMNINLYDHARGTQTGFVRHDDGYVSTSISLRSAHLVGQTILSGHSTYYIYVIATAPNMFNVNDVLGAYSPHPDEQEVSALGGIPYSQIYGWYRVHFGVLDEQLHRNRGYRDRYYSNLDIAPAADGYGLAGFPPEHRAWREEPWIHHAPPGCGN--------TCDEKTQSLGVKFLDEYQSKVKRQIFSGYQSDIDTHNR 235
10 20 30 | | 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 |- 200 210 220 230
32 36 189 198
Chain D from PDB Type:PROTEIN Length:103
aligned with CHTB_VIBCH | P01556 from UniProtKB/Swiss-Prot Length:124
Alignment length:103
31 41 51 61 71 81 91 101 111 121
CHTB_VIBCH 22 TPQNITDLCAEYHNTQIYTLNDKIFSYTESLAGKREMAIITFKNGAIFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN 124
SCOP domains d1s5fd_ D: Cholera toxin SCOP domains
CATH domains 1s5fD00 D:1-103 [code=2.40.50.110, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhh...eeeeeeee...eeeee.......eeee.....eeee.......hhhhhhhhhhhhhhhhhhhhhh..eeeeeee.....eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------- Transcript
1s5f D 1 TPQNITDLCAEYHNTQIHTLNDKIFSYTESLAGKREMAIITFKNGATFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN 103
10 20 30 40 50 60 70 80 90 100
Chain E from PDB Type:PROTEIN Length:103
aligned with CHTB_VIBCH | P01556 from UniProtKB/Swiss-Prot Length:124
Alignment length:103
31 41 51 61 71 81 91 101 111 121
CHTB_VIBCH 22 TPQNITDLCAEYHNTQIYTLNDKIFSYTESLAGKREMAIITFKNGAIFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN 124
SCOP domains d1s5fe_ E: Cholera toxin SCOP domains
CATH domains 1s5fE00 E:1-103 [code=2.40.50.110, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------- Transcript
1s5f E 1 TPQNITDLCAEYHNTQIHTLNDKIFSYTESLAGKREMAIITFKNGATFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN 103
10 20 30 40 50 60 70 80 90 100
Chain F from PDB Type:PROTEIN Length:103
aligned with CHTB_VIBCH | P01556 from UniProtKB/Swiss-Prot Length:124
Alignment length:103
31 41 51 61 71 81 91 101 111 121
CHTB_VIBCH 22 TPQNITDLCAEYHNTQIYTLNDKIFSYTESLAGKREMAIITFKNGAIFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN 124
SCOP domains d1s5ff_ F: Cholera toxin SCOP domains
CATH domains 1s5fF00 F:1-103 [code=2.40.50.110, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------- Transcript
1s5f F 1 TPQNITDLCAEYHNTQIHTLNDKIFSYTESLAGKREMAIITFKNGATFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN 103
10 20 30 40 50 60 70 80 90 100
Chain G from PDB Type:PROTEIN Length:102
aligned with CHTB_VIBCH | P01556 from UniProtKB/Swiss-Prot Length:124
Alignment length:102
31 41 51 61 71 81 91 101 111 121
CHTB_VIBCH 22 TPQNITDLCAEYHNTQIYTLNDKIFSYTESLAGKREMAIITFKNGAIFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMA 123
SCOP domains d1s5fg_ G: Cholera toxin SCOP domains
CATH domains 1s5fG00 G:1-102 [code=2.40.50.110, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
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SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------ Transcript
1s5f G 1 TPQNITDLCAEYHNTQIHTLNDKIFSYTESLAGKREMAIITFKNGATFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMA 102
10 20 30 40 50 60 70 80 90 100
Chain H from PDB Type:PROTEIN Length:103
aligned with CHTB_VIBCH | P01556 from UniProtKB/Swiss-Prot Length:124
Alignment length:103
31 41 51 61 71 81 91 101 111 121
CHTB_VIBCH 22 TPQNITDLCAEYHNTQIYTLNDKIFSYTESLAGKREMAIITFKNGAIFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN 124
SCOP domains d1s5fh_ H: Cholera toxin SCOP domains
CATH domains 1s5fH00 H:1-103 [code=2.40.50.110, no name defined] CATH domains
Pfam domains (1) Enterotoxin_b-1s5fH01 H:1-102 - Pfam domains (1)
Pfam domains (2) Enterotoxin_b-1s5fH02 H:1-102 - Pfam domains (2)
Pfam domains (3) Enterotoxin_b-1s5fH03 H:1-102 - Pfam domains (3)
Pfam domains (4) Enterotoxin_b-1s5fH04 H:1-102 - Pfam domains (4)
Pfam domains (5) Enterotoxin_b-1s5fH05 H:1-102 - Pfam domains (5)
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SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------- Transcript
1s5f H 1 TPQNITDLCAEYHNTQIHTLNDKIFSYTESLAGKREMAIITFKNGATFQVEVPGSQHIDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN 103
10 20 30 40 50 60 70 80 90 100
| Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |