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(-) Description

Title :  SOLUTION NMR STRUCTURE OF PROTEIN PF0455 FROM PYROCOCCUS FURIOSUS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PFR13
 
Authors :  G. Liu, R. Xiao, D. K. Sukumaran, T. Acton, G. T. Montelione, T. Szyperski, Northeast Structural Genomics Consortium (Nesg)
Date :  29 Dec 03  (Deposition) - 04 Jan 05  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Structural Genomics, Nmr, Pfr13, Pf0455, Reduced- Dimensionality, Gft, Northeast Structural Genomics Consortium, Nesg, Protein Structure Initiative, Psi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Liu, R. Xiao, D. K. Sukumaran, T. Acton, G. T. Montelione, T. Szyperski
Solution Structure Of The Hypothetical Protein Pf0455 From Pyrococcus Furiosus: Northeast Structural Genomics Consortium Target Pfr13
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN PF0455
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PPFR13-21.2
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: PF0455
    Organism Scientific: PYROCOCCUS FURIOSUS
    Organism Taxid: 2261

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1S04)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:110
 aligned with Q8U3L1_PYRFU | Q8U3L1 from UniProtKB/TrEMBL  Length:110

    Alignment length:110
                                    10        20        30        40        50        60        70        80        90       100       110
         Q8U3L1_PYRFU     1 MEWEMGLQEEFLELIKLRKKKIEGRLYDEKRRQIKPGDVISFEGGKLKVRVKAIRVYNSFREMLEKEGLENVLPGVKSIEEGIQVYRRFYDEEKEKKYGVVAIEIEPLEY 110
               SCOP domains d1s04a_ A: Hypothetical protein PF0455                                                                         SCOP domains
               CATH domains 1s04A00 A:1-110 Protein pf0470                                                                                 CATH domains
               Pfam domains ----ASCH-1s04A01 A:5-109                                                                                     - Pfam domains
         Sec.struct. author ..eee..hhhhhhhhhhh.........hhhhhhh.....eee....eeeeeee.....hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhh.....eee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------- Transcript
                 1s04 A   1 MEWEMGLQEEFLELIKLRKKKIEGRLYDEKRRQIKPGDVISFEGGKLKVRVKAIRVYNSFREMLEKEGLENVLPGVKSIEEGIQVYRRFYDEEKEKKYGVVAIEIEPLEY 110
                                    10        20        30        40        50        60        70        80        90       100       110
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: PUA (42)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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  1s04
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

6045 CHEMICAL SHIFTS AND STRUCTURAL CONSTRAINTS RELATED ID: PFR13 RELATED DB: TARGETDB