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(-) Description

Title :  HIGH-RESOLUTION NMR STRUCTURE OF A PUTATIVE SULFUR TRANSFERASE (TM0979) FROM THERMOTOGA MARITIMA
 
Authors :  W. Peti, T. Herrmann, K. Wuthrich, Joint Center For Structural Gen (Jcsg)
Date :  14 Nov 03  (Deposition) - 21 Dec 04  (Release) - 28 Jul 10  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Dsrh, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Peti, T. Herrmann, O. Zagnitko, S. K. Grzechnik, K. Wuthrich
Nmr Structure Of The Conserved Hypothetical Protein Tm0979 From Thermotoga Maritima.
Proteins V. 59 387 2005
PubMed-ID: 15723348  |  Reference-DOI: 10.1002/PROT.20352

(-) Compounds

Molecule 1 - CONSERVED HYPOTHETICAL PROTEIN TM0979
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 2336

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:87
 aligned with Q9X074_THEMA | Q9X074 from UniProtKB/TrEMBL  Length:87

    Alignment length:87
                                    10        20        30        40        50        60        70        80       
          Q9X074_THEMA    1 MALVLVKYGTDHPVEKLKIRSAKAEDKIVLIQNGVFWALEELETPAKVYAIKDDFLARGYSEEDSKVPLITYSEFIDLLEGEEKFIG 87
               SCOP domains d1rhxa_ A: Hypothetical protein TM0979                                                  SCOP domains
               CATH domains 1rhxA00 A:1-87  [code=3.40.1260.10, no name defined]                                    CATH domains
               Pfam domains ------------DsrH-1rhxA01 A:13-86                                                      - Pfam domains
         Sec.struct. author ...............hhhhhh...........hhhhhh...........eehhhhhh...........eehhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                  1rhx A  1 MALVLVKYGTDHPVEKLKIRSAKAEDKIVLIQNGVFWALEELETPAKVYAIKDDFLARGYSEEDSKVPLITYSEFIDLLEGEEKFIG 87
                                    10        20        30        40        50        60        70        80
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: DsrEFH-like (7)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (Q9X074_THEMA | Q9X074)
biological process
    GO:0002143    tRNA wobble position uridine thiolation    The process in which a uridine residue at position 34 in the anticodon of a tRNA is post-transcriptionally thiolated at the C2 position. This process involves transfer of a sulfur from cysteine to position C2 by several steps.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

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UniProtKB/TrEMBL
        Q9X074_THEMA | Q9X074: 1x9a

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