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(-) Description

Title :  G50P MUTANT OF PHOSPHONOACETALDEHYDE HYDROLASE IN COMPLEX WITH SUBSTRATE ANALOGUE VINYL SULFONATE
 
Authors :  S. D. Lahiri, G. Zhang, D. Dunaway-Mariano, K. N. Allen
Date :  05 Nov 03  (Deposition) - 31 Aug 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,C  (1x)
Biol. Unit 2:  B,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  E,F  (2x)
Biol. Unit 5:  A (1x),B (1x),C (1x),D (1x)
Keywords :  Haloacid Dehalogenase, Specificity Loop, Phosphonatase, Schiff-Base, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. D. Lahiri, G. Zhang, J. Dai, D. Dunaway-Mariano, K. N. Allen
Analysis Of The Substrate Specificity Loop Of The Had Superfamily Cap Domain
Biochemistry V. 43 2812 2004
PubMed-ID: 15005616  |  Reference-DOI: 10.1021/BI0356810
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PHOSPHONOACETALDEHYDE HYDROLASE
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Mutation: YES
    Organism Scientific: BACILLUS CEREUS
    Organism Taxid: 1396

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A C   
Biological Unit 2 (1x):  B D  
Biological Unit 3 (1x):     EF
Biological Unit 4 (2x):     EF
Biological Unit 5 (1x): A (1x)B (1x)C (1x)D (1x)  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric Unit (2, 12)
No.NameCountTypeFull Name
1ESA6Ligand/IonETHANESULFONIC ACID
2MG6Ligand/IonMAGNESIUM ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1ESA2Ligand/IonETHANESULFONIC ACID
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1ESA2Ligand/IonETHANESULFONIC ACID
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1ESA2Ligand/IonETHANESULFONIC ACID
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 4 (1, 4)
No.NameCountTypeFull Name
1ESA4Ligand/IonETHANESULFONIC ACID
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 5 (0, 0)
No.NameCountTypeFull Name
1ESA-1Ligand/IonETHANESULFONIC ACID
2MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:12 , ALA A:14 , ASP A:186 , ESA A:500 , HOH A:541BINDING SITE FOR RESIDUE MG A 501
02AC2SOFTWAREASP B:12 , ALA B:14 , ASP B:186 , ESA B:500 , HOH B:547BINDING SITE FOR RESIDUE MG B 501
03AC3SOFTWAREASP C:12 , ALA C:14 , ASP C:186 , ESA C:500 , HOH C:539BINDING SITE FOR RESIDUE MG C 501
04AC4SOFTWAREASP D:12 , ALA D:14 , ASP D:186 , ESA D:500 , HOH D:522BINDING SITE FOR RESIDUE MG D 501
05AC5SOFTWAREASP E:12 , ALA E:14 , ASP E:186 , ASP E:190 , ESA E:500BINDING SITE FOR RESIDUE MG E 501
06AC6SOFTWAREASP F:12 , ALA F:14 , ASP F:186 , ESA F:500 , HOH F:502BINDING SITE FOR RESIDUE MG F 501
07AC7SOFTWAREASP A:12 , TRP A:13 , ALA A:14 , THR A:126 , GLY A:127 , ARG A:160 , MG A:501 , HOH A:541BINDING SITE FOR RESIDUE ESA A 500
08AC8SOFTWAREASP B:12 , ALA B:14 , THR B:126 , GLY B:127 , TYR B:128 , MG B:501 , HOH B:547BINDING SITE FOR RESIDUE ESA B 500
09AC9SOFTWAREASP C:12 , TRP C:13 , ALA C:14 , THR C:126 , GLY C:127 , TYR C:128 , ARG C:160 , MG C:501 , HOH C:521BINDING SITE FOR RESIDUE ESA C 500
10BC1SOFTWAREASP D:12 , ALA D:14 , THR D:126 , GLY D:127 , TYR D:128 , ARG D:160 , MG D:501 , HOH D:522BINDING SITE FOR RESIDUE ESA D 500
11BC2SOFTWAREASP E:12 , TRP E:13 , ALA E:14 , THR E:126 , GLY E:127 , TYR E:128 , ARG E:160 , MG E:501BINDING SITE FOR RESIDUE ESA E 500
12BC3SOFTWAREASP F:12 , ALA F:14 , CYS F:22 , THR F:126 , GLY F:127 , TYR F:128 , ARG F:160 , MG F:501 , HOH F:502BINDING SITE FOR RESIDUE ESA F 500

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1RDF)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Arg D:160 -Pro D:161

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1RDF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1RDF)

(-) Exons   (0, 0)

(no "Exon" information available for 1RDF)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:263
 aligned with PHNX_BACCE | O31156 from UniProtKB/Swiss-Prot  Length:264

    Alignment length:263
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261   
           PHNX_BACCE     2 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 264
               SCOP domains d1rdfa_ A: Phosphonoacetaldehyde hydrolase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1rdfA01            1rdfA02 A:24-101 Putative phosphatase; domain 2                               1rdfA01 A:5-23,A:102-260  [code=3.40.50.1000, no name defined]                                                                                                 ------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee...........hhhhhhhhhhhhh.....hhhhhh................hhhhhhhhhhhh....hhhhhh..hhhhhhhhhhhhhhhh....hhhhhhhhhhhh..eeee....hhhhhhhhhhhhhhh...................hhhhhhhhhhhh..hhh.eeeee.hhhhhhhhhhhh.eeeee.................hhhhhhhhhhhhhhhhhhhh..eee....hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rdf A   5 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMPLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 267
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264   


Chain B from PDB  Type:PROTEIN  Length:263
 aligned with PHNX_BACCE | O31156 from UniProtKB/Swiss-Prot  Length:264

    Alignment length:263
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261   
           PHNX_BACCE     2 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 264
               SCOP domains d1rdfb_ B: Phosphonoacetaldehyde hydrolase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1rdfB01            1rdfB02 B:24-101 Putative phosphatase; domain 2                               1rdfB01 B:5-23,B:102-260  [code=3.40.50.1000, no name defined]                                                                                                 ------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..........hhhhhhhhhhhhhhhh...hhhhhhh.......hhhhhh..........................hhhhhhhhhhhhhhh.....hhhhhhhhhhh...eeee....hhhhhhhhhhhhhh.........hhhhh......hhhhhhhhhhhh..hhh.eeeee.hhhhhhhhhhhh.eeeee.........hhhhhh....hhhhhhhhhhhhhhhhh...eee.hhhhhhhhhhhhhhh.eee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rdf B   5 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMPLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 267
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264   


Chain C from PDB  Type:PROTEIN  Length:263
 aligned with PHNX_BACCE | O31156 from UniProtKB/Swiss-Prot  Length:264

    Alignment length:263
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261   
           PHNX_BACCE     2 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 264
               SCOP domains d1rdfc_ C: Phosphonoacetaldehyde hydrolase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1rdfC01            1rdfC02 C:24-101 Putative phosphatase; domain 2                               1rdfC01 C:5-23,C:102-260  [code=3.40.50.1000, no name defined]                                                                                                 ------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.............hhhhhhhhh.......hhhhhh......hhhhhh....................hhhhhh....hhhhhhh.hhhhhh...hhhhhhhhh......eeee....hhhhhhhhhhhhhhhh..................hhhhhhhhhhhh..hhh.eeeee.hhhhhhhhhhhh.eeeee...hhhhh.........hhhhhhhhhhhhhhhhhhh...eee....hhhhhhhhhhhh.eee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rdf C   5 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMPLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 267
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264   


Chain D from PDB  Type:PROTEIN  Length:263
 aligned with PHNX_BACCE | O31156 from UniProtKB/Swiss-Prot  Length:264

    Alignment length:263
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261   
           PHNX_BACCE     2 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 264
               SCOP domains d1rdfd_ D: Phosphonoacetaldehyde hydrolase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1rdfD01            1rdfD02 D:24-101 Putative phosphatase; domain 2                               1rdfD01 D:5-23,D:102-260  [code=3.40.50.1000, no name defined]                                                                                                 ------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..........hhhhhhhhhhhhhhh....hhhhhhh......hhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhh..eeee....hhhhhh.................hhhhh.......hhhhhhhhhh........eeee.hhhhhhhhhhhh.eeeee...........hhhhhhhhhhhhhhhhhhhhhhhhh...eee....hhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rdf D   5 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMPLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 267
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264   


Chain E from PDB  Type:PROTEIN  Length:263
 aligned with PHNX_BACCE | O31156 from UniProtKB/Swiss-Prot  Length:264

    Alignment length:263
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261   
           PHNX_BACCE     2 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 264
               SCOP domains d1rdfe_ E: Phosphonoacetaldehyde hydrolase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1rdfE01            1rdfE02 E:24-101 Putative phosphatase; domain 2                               1rdfE01 E:5-23,E:102-260  [code=3.40.50.1000, no name defined]                                                                                                 ------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..........hhhhhhhhhhhh.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh..eeee....hhhhhhhhhhhhhh.........hhhhh......hhhhhhhhhhhh.......eeee.hhhhhhhhhhhh.eeeee.........hhhhhh..hhhhhhhhhhhhhhhhhhh...eee.hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rdf E   5 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMPLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 267
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264   


Chain F from PDB  Type:PROTEIN  Length:263
 aligned with PHNX_BACCE | O31156 from UniProtKB/Swiss-Prot  Length:264

    Alignment length:263
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261   
           PHNX_BACCE     2 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 264
               SCOP domains d1rdff_ F: Phosphonoacetaldehyde hydrolase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1rdfF01            1rdfF02 F:24-101 Putative phosphatase; domain 2                               1rdfF01 F:5-23,F:102-260  [code=3.40.50.1000, no name defined]                                                                                                 ------- CATH domains
           Pfam domains (1) ----HAD_2-1rdfF01 F:9-204                                                                                                                                                                               --------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----HAD_2-1rdfF02 F:9-204                                                                                                                                                                               --------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) ----HAD_2-1rdfF03 F:9-204                                                                                                                                                                               --------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) ----HAD_2-1rdfF04 F:9-204                                                                                                                                                                               --------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) ----HAD_2-1rdfF05 F:9-204                                                                                                                                                                               --------------------------------------------------------------- Pfam domains (5)
           Pfam domains (6) ----HAD_2-1rdfF06 F:9-204                                                                                                                                                                               --------------------------------------------------------------- Pfam domains (6)
         Sec.struct. author ...eeeee..........hhhhhhhhhhhhh.....hhhhhh.......hhhhhhhhh...hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh...eeeee...hhhhhhhhhhhhhh.........hhhhh......hhhhhhhhhhhh..hhh.ee....hhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhhhhhh...eee.hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rdf F   5 KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMPLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEKQELIIS 267
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Rossmann fold (7312)
(-)
Homologous Superfamily: [code=3.40.50.1000, no name defined] (211)
(-)
Bacillus cereus. Organism_taxid: 1396. (8)
1a1rdfA01A:5-23,A:102-260
1b1rdfE01E:5-23,E:102-260
1c1rdfF01F:5-23,F:102-260
1d1rdfB01B:5-23,B:102-260
1e1rdfC01C:5-23,C:102-260
1f1rdfD01D:5-23,D:102-260
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 6)

Asymmetric Unit
(-)
Clan: HAD (186)
(-)
Family: HAD_2 (33)
(-)
Bacillus cereus (5)
1aHAD_2-1rdfF01F:9-204
1bHAD_2-1rdfF02F:9-204
1cHAD_2-1rdfF03F:9-204
1dHAD_2-1rdfF04F:9-204
1eHAD_2-1rdfF05F:9-204
1fHAD_2-1rdfF06F:9-204

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (PHNX_BACCE | O31156)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0050194    phosphonoacetaldehyde hydrolase activity    Catalysis of the reaction: H(2)O + phosphonoacetaldehyde = acetaldehyde + H(+) + phosphate.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0019700    organic phosphonate catabolic process    The chemical reactions and pathways resulting in the breakdown of phosphonates, any organic compound containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Catabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.

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Asymmetric Unit
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        PHNX_BACCE | O31156: 1fez 1rql 1rqn 1swv 1sww 2iof 2ioh

(-) Related Entries Specified in the PDB File

1fez THE CRYSTAL STRUCTURE OF BACILLUS CEREUS PHOSPHONOACETALDEHYDE HYDROLASE COMPLEXED WITH TUNGSTATE, A PRODUCT ANALOG
1lvh THE STRUCTURE OF PHOSPHORYLATED BETA-PHOSPHOGLUCOMUTASE FROM LACTOCCOCUS LACTIS TO 2.3 ANGSTROM RESOLUTION