1R9C - JenaLib

Title :   CRYSTAL STRUCTURE OF FOSFOMYCIN RESISTANCE PROTEIN FOSX FROM MESORHIZOBIUM LOTI

Authors :   K. L. Fillgrove, S. Pakhomova, M. E. Newcomer, R. N. Armstrong

Date :   28 Oct 03 (Deposition) - 10 Feb 04 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.83

Chains :   Asym./Biol. Unit : A,B

Keywords :   Fosfomycin Resistance Protein, Mn Binding, Antibiotic Resistance, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. L. Fillgrove, S. Pakhomova, M. E. Newcomer, R. N. Armstrong
Mechanistic Diversity Of Fosfomycin Resistance In Pathogeni Microorganisms.
J. Am. Chem. Soc. V. 125 15730 2003
PubMed-ID: 14677948 | Reference-DOI: 10.1021/JA039307Z

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 2)

Sites (2, 2)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:125
 aligned with FOSX_RHILO | Q98GG1 from UniProtKB/Swiss-Prot  Length:139

    Alignment length:130
                                    10        20        30        40        50        60        70        80        90       100       110       120       130
           FOSX_RHILO     1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGTLTERLAR 130
               SCOP domains d1r9ca_ A: Fosfomycin resistance protein FosX                                                                                      SCOP domains
               CATH domains 1r9cA00 A:1-130 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeee.hhhhhhhhhhhhhh.eeeee.hhh......eeeeee..eeeeeee..........eeeee.hhhhhhhhhhhhhhhh........-----..eeeee.....eeeee..hhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---VOC  PDB: A:4-122 UniProt: 4-122                                                                                       -------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r9c A   1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRP-----GRSIYFYDDDNHMFELHTGTLTERLAR 130
                                    10        20        30        40        50        60        70        80        90       | -   |   110       120       130
                                                                                                                            98   104

Chain B from PDB  Type:PROTEIN  Length:118
 aligned with FOSX_RHILO | Q98GG1 from UniProtKB/Swiss-Prot  Length:139

    Alignment length:129
                                    10        20        30        40        50        60        70        80        90       100       110       120         
           FOSX_RHILO     1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGTLTERLA 129
               SCOP domains d1r9cb_ B: Fosfomycin resistance         protein FosX                                                                             SCOP domains
               CATH domains 1r9cB00 B:1-129 2,3-Dihydroxybiph        enyl 1,2-Dioxygenase, domain 1                                                           CATH domains
           Pfam domains (1) ---Glyoxalase-1r9cB01 B:4-119                                                                                          ---------- Pfam domains (1)
           Pfam domains (2) ---Glyoxalase-1r9cB02 B:4-119                                                                                          ---------- Pfam domains (2)
         Sec.struct. author ...eeeeeeeee.hhhhhhhhhhhhhh.eeee.--------..eeeeee..eeeeeee..........eeeeee...hhhhhhhhhhhh..........---...eeeee.....eeeee..hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---VOC  PDB: B:4-122 UniProt: 4-122                                                                                       ------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r9c B   1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYA--------SREKFFLIGDIWVAIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPR---EGRSIYFYDDDNHMFELHTGTLTERLA 129
                                    10        20        30  |      - |      50        60        70        80        90        |-  |    110       120         
                                                           33       42                                                       99 103

Legend:		→ Mismatch	(orange background)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (1, 2)

Gene Ontology (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (FOSX_RHILO | Q98GG1)

molecular function
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
biological process
	GO:0046677	response to antibiotic	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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	1r9c
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