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(-) Description

Title :  LEISHMANIA MAJOR HYPOTHETICAL PROTEIN
 
Authors :  G. W. Han, E. A. Merritt, Structural Genomics Of Pathogenic Protoz Consortium (Sgpp)
Date :  17 Oct 03  (Deposition) - 02 Dec 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.86
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Unknown Function, Psi, Protein Structure Initiative, Structural Genomics Of Pathogenic Protozoa Consortium, Sgpp (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. W. Han, E. A. Merritt
Leishmania Major Hypothetical Protein
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET14B
    Expression System Strain: BL-21 STAR, T7 SYSTEM
    Expression System Taxid: 562
    Expression System Vector: PLASMID
    Organism Scientific: LEISHMANIA MAJOR
    Organism Taxid: 5664

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:39 , ARG A:43 , GLY A:110 , SER A:111 , VAL A:112 , HOH A:261 , HOH A:281BINDING SITE FOR RESIDUE GOL A 200

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1R75)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1R75)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1R75)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1R75)

(-) Exons   (0, 0)

(no "Exon" information available for 1R75)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:110
 aligned with P84150_LEIMA | P84150 from UniProtKB/TrEMBL  Length:133

    Alignment length:121
                                    21        31        41        51        61        71        81        91       101       111       121       131 
         P84150_LEIMA    12 VTFKNGKPTVKGTKTYPMFSNILYRIADTEARRWAFYNDSKELIIHVAVLFDYDSQIVPLGDTTAFRIDDPDEGNEDDFGKYLCEVDVRPLETQMFVEGSVTGWRVDTLEARTAEDERGYR 132
               SCOP domains d1r75a_ A: Unnamed hypothetical protein                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---DUF1935-1r75A01 A:15-124                                                                                      -------- Pfam domains
         Sec.struct. author .............eeee.....eeeeee....eeeeee....eeeeeeeeee...eeee....eeee.-----------.eeeeeeee....eeeeeeee...eeeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r75 A  12 VTFKNGKPTVKGTKTYPMFSNILYRIADTEARRWAFYNDSKELIIHVAVLFDYDSQIVPLGDTTAFRI-----------GKYLCEVDVRPLETQMFVEGSVTGWRVDTLEARTAEDERGYR 132
                                    21        31        41        51        61        71       | -        91       101       111       121       131 
                                                                                              79          91
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1R75)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: DUF1935] (1)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  1r75
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 Related Entries

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