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(-) Description

Title :  CRYSTAL STRUCTURE OF THE FIRST RNA DUPLEX IN L-CONFORMATION AT 1.9A RESOLUTION
 
Authors :  M. Vallazza, M. Perbandt, S. Klussmann, W. Rypniewski, V. A. Erdmann, C. Betzel
Date :  02 Oct 03  (Deposition) - 23 Dec 03  (Release) - 04 Aug 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  L-Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Vallazza, M. Perbandt, S. Klussmann, W. Rypniewski, H. M. Einspahr, V. A. Erdmann, C. H. Betzel
First Look At Rna In L-Configuration.
Acta Crystallogr. , Sect. D V. 60 1 2004
PubMed-ID: 14684885  |  Reference-DOI: 10.1107/S0907444903027690
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - L-RNA
    Chains: A, C
    Engineered: YES
    Synthetic: YES
 
Molecule 2 - L-RNA
    Chains: B, D
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 32)

Asymmetric/Biological Unit (3, 32)
No.NameCountTypeFull Name
10C12Mod. ResidueL-CYTIDINE-5'-MONOPHOSPHATE
20G16Mod. ResidueL-GUANOSINE-5'-MONOPHOSPHATE
30U4Mod. ResidueL-URIDINE-5'-MONOPHOSPHATE

(-) Sites  (0, 0)

(no "Site" information available for 1R3O)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1R3O)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1R3O)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1R3O)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1R3O)

(-) Exons   (0, 0)

(no "Exon" information available for 1R3O)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:OTHER  Length:8
                                       
                  1r3o A 79 xxxxxxxx 86
                            ||||||||
                            ||||||||
                           79-0C||||
                            80-0U|||
                             81-0G||
                              82-0G|
                               83-0G
                                84-0C
                                 85-0G
                                  86-0G


Chain B from PDB  Type:OTHER  Length:8
                                       
                  1r3o B 90 xxxxxxxx 97
                            ||||||||
                            ||||||||
                           90-0C||||
                            91-0C|||
                             92-0G||
                              93-0C|
                               94-0C
                                95-0U
                                 96-0G
                                  97-0G


Chain C from PDB  Type:OTHER  Length:8
                                       
                  1r3o C 79 xxxxxxxx 86
                            ||||||||
                            ||||||||
                           79-0C||||
                            80-0U|||
                             81-0G||
                              82-0G|
                               83-0G
                                84-0C
                                 85-0G
                                  86-0G


Chain D from PDB  Type:OTHER  Length:8
                                       
                  1r3o D 90 xxxxxxxx 97
                            ||||||||
                            ||||||||
                           90-0C||||
                            91-0C|||
                             92-0G||
                              93-0C|
                               94-0C
                                95-0U
                                 96-0G
                                  97-0G
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 1R3O)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1R3O)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1R3O)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1R3O)

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