Chain A from PDB Type:PROTEIN Length:402
aligned with Q844J9_BACTU | Q844J9 from UniProtKB/TrEMBL Length:462
Alignment length:402
69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459
Q844J9_BACTU 60 TDKVEDFKEDKEKAKEWGKEKEKEWKLTATEKGKMNNFLDNKNDIKTNYKEITFSMAGSFEDEIKDLKEIDKIFDKANLSSPIITYKNVEPATIGFNKSLTEGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTVQQVSSKERVILKVKVPSGKGSTTPTKAGIILNNSEYKMLIDNGYMVHVDKVSKVVKKGVECLQVEGTLKKSLDFKNDINAGAHSWGMKNYEEWAKDLTDLQREALDGYARQDYKEINNYLRNQGGNGNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAIGGFANEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT 461
SCOP domains d1qs1a1 A:60-264 Vegetative insecticidal protein 2 (VIP2) d1qs1a2 A:265-461 Vegetative insecticidal protein 2 (VIP2) SCOP domains
CATH domains --1qs1A01 A:62-264 Toxin ADP-ribosyltransferase; Chain A, domain 1 1qs1A02 A:265-461 Toxin ADP-ribosyltransferase; Chain A, domain 1 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .........hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.....eeeeeeehhhhhh.....ee..eehhhhhhhhhhhhh..ee.....eeee...........eeeeeee...........eeeeee..eeeeee...eeeeeeeeeeeee..eeeeeeeeeeee..........hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.......eeeeeeehhhhhh........hhhhhhhhhh..eeee...eeee.............eeeeeee.....eee.hhhh......eeee...eeeeeeeeeeeee..eeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qs1 A 60 TDKVEDFKEDKEKAKEWGKEKEKEWKLTATEKGKMNNFLDNKNDIKTNYKEITFSMAGSFEDEIKDLKEIDKMFDKTNLSNSIITYKNVEPTTIGFNKSLTEGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTAQQVSSKERVILKVTVPSGKGSTTPTKAGVILNNSEYKMLIDNGYMVHVDKVSKVVKKGVECLQIEGTLKKSLDFKNDINAEAHSWGMKNYEEWAKDLTDSQREALDGYARQDYKEINNYLRNQGGSGNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAIGGFASEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT 461
69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459
Chain B from PDB Type:PROTEIN Length:402
aligned with Q844J9_BACTU | Q844J9 from UniProtKB/TrEMBL Length:462
Alignment length:402
69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459
Q844J9_BACTU 60 TDKVEDFKEDKEKAKEWGKEKEKEWKLTATEKGKMNNFLDNKNDIKTNYKEITFSMAGSFEDEIKDLKEIDKIFDKANLSSPIITYKNVEPATIGFNKSLTEGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTVQQVSSKERVILKVKVPSGKGSTTPTKAGIILNNSEYKMLIDNGYMVHVDKVSKVVKKGVECLQVEGTLKKSLDFKNDINAGAHSWGMKNYEEWAKDLTDLQREALDGYARQDYKEINNYLRNQGGNGNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAIGGFANEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT 461
SCOP domains d1qs1b1 B:1060-1264 Vegetative insecticidal protein 2 (VIP2) d1qs1b2 B:1265-1461 Vegetative insecticidal protein 2 (VIP2) SCOP domains
CATH domains --1qs1B01 B:1062-1264 Toxin ADP-ribosyltransferase; Chain A, domain 1 1qs1B02 B:1265-1461 Toxin ADP-ribosyltransferase; Chain A, domain 1 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .........hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh........eeeeeeehhhhhh.....ee..eehhhhhhhhhhhhh..ee.....eeee...........eeeeeee...........eeeeee..eeeeee...eeeeeeeeeeeee..eeeeeeeeeeee..........hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.....eeeeeeehhhhhh........hhhhhhhhhh..eeee...eeee.....hhhhh...eeeeeee.....eee.hhh.......eeee...eeeeeeeeeeeee..eeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qs1 B 1060 TDKVEDFKEDKEKAKEWGKEKEKEWKLTATEKGKMNNFLDNKNDIKTNYKEITFSMAGSFEDEIKDLKEIDKMFDKTNLSNSIITYKNVEPTTIGFNKSLTEGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTAQQVSSKERVILKVTVPSGKGSTTPTKAGVILNNSEYKMLIDNGYMVHVDKVSKVVKKGVECLQIEGTLKKSLDFKNDINAEAHSWGMKNYEEWAKDLTDSQREALDGYARQDYKEINNYLRNQGGSGNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAIGGFASEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT 1461
1069 1079 1089 1099 1109 1119 1129 1139 1149 1159 1169 1179 1189 1199 1209 1219 1229 1239 1249 1259 1269 1279 1289 1299 1309 1319 1329 1339 1349 1359 1369 1379 1389 1399 1409 1419 1429 1439 1449 1459
Chain C from PDB Type:PROTEIN Length:402
aligned with Q844J9_BACTU | Q844J9 from UniProtKB/TrEMBL Length:462
Alignment length:402
69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459
Q844J9_BACTU 60 TDKVEDFKEDKEKAKEWGKEKEKEWKLTATEKGKMNNFLDNKNDIKTNYKEITFSMAGSFEDEIKDLKEIDKIFDKANLSSPIITYKNVEPATIGFNKSLTEGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTVQQVSSKERVILKVKVPSGKGSTTPTKAGIILNNSEYKMLIDNGYMVHVDKVSKVVKKGVECLQVEGTLKKSLDFKNDINAGAHSWGMKNYEEWAKDLTDLQREALDGYARQDYKEINNYLRNQGGNGNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAIGGFANEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT 461
SCOP domains d1qs1c1 C:2060-2264 Vegetative insecticidal protein 2 (VIP2) d1qs1c2 C:2265-2461 Vegetative insecticidal protein 2 (VIP2) SCOP domains
CATH domains --1qs1C01 C:2062-2264 Toxin ADP-ribosyltransferase; Chain A, domain 1 1qs1C02 C:2265-2461 Toxin ADP-ribosyltransferase; Chain A, domain 1 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .........hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh..hhhhhhh.....hhhhhhhhhhhhhhhhhh.....eeeeeeehhhhhh.....ee..ee..hhhhhhhhhhh..ee.....eeee...........eeeeeee...........eeeeee..eeeeee...eeeeeeeeeeeee..eeeeeeeeeeee..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.......eeeeeeehhhhhh........hhhhhhhhhh..eeee...eeee.....hhhhh...eeeeeee.....eee.hhh.......eeee...eeeeeeeeeeeee..eeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qs1 C 2060 TDKVEDFKEDKEKAKEWGKEKEKEWKLTATEKGKMNNFLDNKNDIKTNYKEITFSMAGSFEDEIKDLKEIDKMFDKTNLSNSIITYKNVEPTTIGFNKSLTEGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTAQQVSSKERVILKVTVPSGKGSTTPTKAGVILNNSEYKMLIDNGYMVHVDKVSKVVKKGVECLQIEGTLKKSLDFKNDINAEAHSWGMKNYEEWAKDLTDSQREALDGYARQDYKEINNYLRNQGGSGNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAIGGFASEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT 2461
2069 2079 2089 2099 2109 2119 2129 2139 2149 2159 2169 2179 2189 2199 2209 2219 2229 2239 2249 2259 2269 2279 2289 2299 2309 2319 2329 2339 2349 2359 2369 2379 2389 2399 2409 2419 2429 2439 2449 2459
Chain D from PDB Type:PROTEIN Length:402
aligned with Q844J9_BACTU | Q844J9 from UniProtKB/TrEMBL Length:462
Alignment length:402
69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459
Q844J9_BACTU 60 TDKVEDFKEDKEKAKEWGKEKEKEWKLTATEKGKMNNFLDNKNDIKTNYKEITFSMAGSFEDEIKDLKEIDKIFDKANLSSPIITYKNVEPATIGFNKSLTEGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTVQQVSSKERVILKVKVPSGKGSTTPTKAGIILNNSEYKMLIDNGYMVHVDKVSKVVKKGVECLQVEGTLKKSLDFKNDINAGAHSWGMKNYEEWAKDLTDLQREALDGYARQDYKEINNYLRNQGGNGNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAIGGFANEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT 461
SCOP domains d1qs1d1 D:3060-3264 Vegetative insecticidal protein 2 (VIP2) d1qs1d2 D:3265-3461 Vegetative insecticidal protein 2 (VIP2) SCOP domains
CATH domains --1qs1D01 D:3062-3264 Toxin ADP-ribosyltransferase; Chain A, domain 1 1qs1D02 D:3265-3461 Toxin ADP-ribosyltransferase; Chain A, domain 1 CATH domains
Pfam domains (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPrib_exo_Tox-1qs1D01 D:3276-3461 Pfam domains (1)
Pfam domains (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPrib_exo_Tox-1qs1D02 D:3276-3461 Pfam domains (2)
Pfam domains (3) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPrib_exo_Tox-1qs1D03 D:3276-3461 Pfam domains (3)
Pfam domains (4) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPrib_exo_Tox-1qs1D04 D:3276-3461 Pfam domains (4)
Pfam domains (5) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPrib_exo_Tox-1qs1D05 D:3276-3461 Pfam domains (5)
Pfam domains (6) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPrib_exo_Tox-1qs1D06 D:3276-3461 Pfam domains (6)
Pfam domains (7) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPrib_exo_Tox-1qs1D07 D:3276-3461 Pfam domains (7)
Pfam domains (8) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPrib_exo_Tox-1qs1D08 D:3276-3461 Pfam domains (8)
Sec.struct. author .........hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.....eeeeeeehhhhhh.....ee..eehhhhhhhhhhhhh..ee.....eeee...........eeeeeee...........eeeeee..eeeeee...eeeeeeeeeeeee..eeeeeeeeeeee..........hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh......eeeeeeehhhhhh........hhhhhhhhhh..eeee...eeee.............eeeeeee.....eee.hhhh......eeee...eeeeeeeeeeeee..eeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1qs1 D 3060 TDKVEDFKEDKEKAKEWGKEKEKEWKLTATEKGKMNNFLDNKNDIKTNYKEITFSMAGSFEDEIKDLKEIDKMFDKTNLSNSIITYKNVEPTTIGFNKSLTEGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTAQQVSSKERVILKVTVPSGKGSTTPTKAGVILNNSEYKMLIDNGYMVHVDKVSKVVKKGVECLQIEGTLKKSLDFKNDINAEAHSWGMKNYEEWAKDLTDSQREALDGYARQDYKEINNYLRNQGGSGNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAIGGFASEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT 3461
3069 3079 3089 3099 3109 3119 3129 3139 3149 3159 3169 3179 3189 3199 3209 3219 3229 3239 3249 3259 3269 3279 3289 3299 3309 3319 3329 3339 3349 3359 3369 3379 3389 3399 3409 3419 3429 3439 3449 3459
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |