1QHY - JenaLib

Title :   CHLORAMPHENICOL PHOSPHOTRANSFERASE FROM STREPTOMYCES VENEZUELAE IN COMPLEX WITH ATPGAMMAS AND CHLORAMPHENICOL

Authors :   T. Izard

Date :   01 Jun 99 (Deposition) - 07 Jun 00 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.60

Chains :   Asym. Unit : A
Biol. Unit 1: A  (4x)

Keywords :   Kinase, Antibiotic Resistance, Phosphorylation, Mononucleotide Binding Fold, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. Izard, J. Ellis
The Crystal Structures Of Chloramphenicol Phosphotransferas Reveal A Novel Inactivation Mechanism
Embo J. V. 19 2690 2000
PubMed-ID: 10835366 | Reference-DOI: 10.1093/EMBOJ/19.1.1

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 5)

Sites (5, 5)

Asymmetric Unit (5, 5)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ALA A:50 , GLU A:51 , CLM A:888	BINDING SITE FOR RESIDUE SO4 A 602
2	AC2	SOFTWARE	SER A:17 , ASP A:92 , AGS A:501	BINDING SITE FOR RESIDUE MG A 500
3	AC3	SOFTWARE	SER A:12 , SER A:13 , GLY A:15 , LYS A:16 , SER A:17 , GLY A:18 , ASP A:37 , ARG A:129 , ARG A:133 , ARG A:136 , THR A:160 , LYS A:163 , SER A:165 , MG A:500 , CLM A:999 , HOH A:1007	BINDING SITE FOR RESIDUE AGS A 501
4	AC4	SOFTWARE	VAL A:36 , ASP A:37 , ILE A:54 , PHE A:56 , ILE A:64 , ASP A:93 , VAL A:94 , LEU A:96 , ARG A:136 , MET A:140 , GLN A:144 , AGS A:501	BINDING SITE FOR RESIDUE CLM A 999
5	AC5	SOFTWARE	PRO A:28 , PRO A:30 , PRO A:44 , LYS A:46 , MET A:47 , ALA A:50 , GLU A:67 , SO4 A:602	BINDING SITE FOR RESIDUE CLM A 888

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:178
 aligned with CPT_STRVP | Q56148 from UniProtKB/Swiss-Prot  Length:178

    Alignment length:178
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170        
            CPT_STRVP     1 MTTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWVGVRCDGAVAEGRETARGDRVAGMAAKQAYVVHEGVEYDVEVDTTHKESIECAWAIAAHVVP 178
               SCOP domains d1qhya_ A: Chloramphenicol phosphotransferase                                                                                                                                      SCOP domains
               CATH domains 1qhyA00 A:1-178 P-loop containing nucleotide triphosphate hydrolases                                                                                                               CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee.....hhhhhhhhhhhhh...eeeee........hhhhhhh...eee.....eeehhhhhhhhhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhh....hhhhhhhhhhhh.....eeee....hhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1qhy A   1 MTTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWVGVRCDGAVAEGRETARGDRVAGMAAKQAYVVHEGVEYDVEVDTTHKESIECAWAIAAHVVP 178
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (0, 0)

Gene Ontology (6, 6)

Asymmetric Unit(hide GO term definitions)

Chain A (CPT_STRVP | Q56148)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0046677	response to antibiotic	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.

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