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(-) Description

Title :  CRYSTAL STRUCTURE OF THE CHAPERONIN FROM THERMOCOCCUS STRAIN KS-1 (NUCLEOTIDE-FREE FORM)
 
Authors :  Y. Shomura, T. Yoshida, R. Iizuka, M. Yohda, T. Maruyama, K. Miki
Date :  26 Jul 03  (Deposition) - 27 Jan 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B,C,D  (4x)
Biol. Unit 2:  A,B  (4x)
Biol. Unit 3:  C,D  (4x)
Keywords :  Hexadecamer, Closed State, Chaperone (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Shomura, T. Yoshida, R. Iizuka, T. Maruyama, M. Yohda, K. Miki
Crystal Structures Of The Group Ii Chaperonin From Thermococcus Strain Ks-1: Steric Hindrance By The Substituted Amino Acid, And Inter-Subunit Rearrangement Between Two Crystal Forms.
J. Mol. Biol. V. 335 1265 2004
PubMed-ID: 14729342  |  Reference-DOI: 10.1016/J.JMB.2003.11.028
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - THERMOSOME ALPHA SUBUNIT
    Chains: A, B, C, D
    EC Number: 3.6.4.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PK1EALPHA
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: THSA OR CPKA
    Mutation: YES
    Organism Scientific: THERMOCOCCUS SP.
    Organism Taxid: 79679
    Strain: KS-1
    Synonym: THERMOSOME SUBUNIT 1, CHAPERONIN ALPHA SUBUNIT

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (4x): ABCD
Biological Unit 2 (4x): AB  
Biological Unit 3 (4x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1SO44Ligand/IonSULFATE ION
Biological Unit 1 (1, 16)
No.NameCountTypeFull Name
1SO416Ligand/IonSULFATE ION
Biological Unit 2 (1, 8)
No.NameCountTypeFull Name
1SO48Ligand/IonSULFATE ION
Biological Unit 3 (1, 8)
No.NameCountTypeFull Name
1SO48Ligand/IonSULFATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:43 , GLY A:96 , THR A:97 , THR A:98 , THR A:99BINDING SITE FOR RESIDUE SO4 A 1527
2AC2SOFTWARELEU B:43 , GLY B:96 , THR B:97 , THR B:98 , THR B:99BINDING SITE FOR RESIDUE SO4 B 2527
3AC3SOFTWARELEU C:43 , GLY C:96 , THR C:97 , THR C:98 , THR C:99BINDING SITE FOR RESIDUE SO4 C 3527
4AC4SOFTWARELEU D:43 , GLY D:96 , THR D:97 , THR D:98 , THR D:99 , HOH D:4561BINDING SITE FOR RESIDUE SO4 D 4527

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1Q2V)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1Q2V)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1Q2V)

(-) PROSITE Motifs  (3, 12)

Asymmetric Unit (3, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TCP1_1PS00750 Chaperonins TCP-1 signature 1.THSA_THEK140-52
 
 
 		  4A:40-52
B:40-52
C:40-52
D:40-52
THSA_THEKO40-52
 
 
 		  4A:40-52
B:40-52
C:40-52
D:40-52
2TCP1_2PS00751 Chaperonins TCP-1 signature 2.THSA_THEK161-77
 
 
 		  4A:61-77
B:61-77
C:61-77
D:61-77
THSA_THEKO61-77
 
 
 		  4A:61-77
B:61-77
C:61-77
D:61-77
3TCP1_3PS00995 Chaperonins TCP-1 signature 3.THSA_THEK189-97
 
 
 		  4A:89-97
B:89-97
C:89-97
D:89-97
THSA_THEKO89-97
 
 
 		  4A:89-97
B:89-97
C:89-97
D:89-97
Biological Unit 1 (3, 96)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TCP1_1PS00750 Chaperonins TCP-1 signature 1.THSA_THEK140-52
 
 
 		  16A:40-52
B:40-52
C:40-52
D:40-52
THSA_THEKO40-52
 
 
 		  16A:40-52
B:40-52
C:40-52
D:40-52
2TCP1_2PS00751 Chaperonins TCP-1 signature 2.THSA_THEK161-77
 
 
 		  16A:61-77
B:61-77
C:61-77
D:61-77
THSA_THEKO61-77
 
 
 		  16A:61-77
B:61-77
C:61-77
D:61-77
3TCP1_3PS00995 Chaperonins TCP-1 signature 3.THSA_THEK189-97
 
 
 		  16A:89-97
B:89-97
C:89-97
D:89-97
THSA_THEKO89-97
 
 
 		  16A:89-97
B:89-97
C:89-97
D:89-97
Biological Unit 2 (3, 48)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TCP1_1PS00750 Chaperonins TCP-1 signature 1.THSA_THEK140-52
 
 
 		  8A:40-52
B:40-52
-
-
THSA_THEKO40-52
 
 
 		  8A:40-52
B:40-52
-
-
2TCP1_2PS00751 Chaperonins TCP-1 signature 2.THSA_THEK161-77
 
 
 		  8A:61-77
B:61-77
-
-
THSA_THEKO61-77
 
 
 		  8A:61-77
B:61-77
-
-
3TCP1_3PS00995 Chaperonins TCP-1 signature 3.THSA_THEK189-97
 
 
 		  8A:89-97
B:89-97
-
-
THSA_THEKO89-97
 
 
 		  8A:89-97
B:89-97
-
-
Biological Unit 3 (3, 48)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TCP1_1PS00750 Chaperonins TCP-1 signature 1.THSA_THEK140-52
 
 
 		  8-
-
C:40-52
D:40-52
THSA_THEKO40-52
 
 
 		  8-
-
C:40-52
D:40-52
2TCP1_2PS00751 Chaperonins TCP-1 signature 2.THSA_THEK161-77
 
 
 		  8-
-
C:61-77
D:61-77
THSA_THEKO61-77
 
 
 		  8-
-
C:61-77
D:61-77
3TCP1_3PS00995 Chaperonins TCP-1 signature 3.THSA_THEK189-97
 
 
 		  8-
-
C:89-97
D:89-97
THSA_THEKO89-97
 
 
 		  8-
-
C:89-97
D:89-97

(-) Exons   (0, 0)

(no "Exon" information available for 1Q2V)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:518
 aligned with THSA_THEK1 | P61112 from UniProtKB/Swiss-Prot  Length:548

    Alignment length:518
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        
           THSA_THEK1     9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
               SCOP domains d1q2va1 A:9-145,A:406-526 Thermosome, E domain                                                                                           d1q2va3 A:146-216,A:370-405 Thermosome, I domain                       d1q2va2 A:217-369 Thermosome, A-domain                                                                                                                   d1q2va3 A:146-216,A:370-405         d1q2va1 A:9-145,A:406-526 Thermosome, E domain                                                                            SCOP domains
               CATH domains 1q2vA01 A:9-146,A:406-526 GROEL, domain 1                                                                                                 1q2vA02 A:147-217,A:370-405 GROEL, domain 2                            1q2vA03 A:218-369 GroEL                                                                                                                                 1q2vA02 A:147-217,A:370-405         1q2vA01 A:9-146,A:406-526 GROEL, domain 1                                                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeehhhhhhhhhhhhhhhhhhhhhhh.....eeeee.....eeee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhee....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhee....ee.hhh.eeeeeee..hhhhheee..eee...........ee...eeeee..............eee..hhhhhhhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh..ee.hhhhhhhhhhee..eeeeeee..eeeeeee.......eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhh..eeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------TCP1_1       --------TCP1_2           -----------TCP1_3   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1q2v A   9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        


Chain A from PDB  Type:PROTEIN  Length:518
 aligned with THSA_THEKO | P61111 from UniProtKB/Swiss-Prot  Length:548

    Alignment length:518
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        
           THSA_THEKO     9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
               SCOP domains d1q2va1 A:9-145,A:406-526 Thermosome, E domain                                                                                           d1q2va3 A:146-216,A:370-405 Thermosome, I domain                       d1q2va2 A:217-369 Thermosome, A-domain                                                                                                                   d1q2va3 A:146-216,A:370-405         d1q2va1 A:9-145,A:406-526 Thermosome, E domain                                                                            SCOP domains
               CATH domains 1q2vA01 A:9-146,A:406-526 GROEL, domain 1                                                                                                 1q2vA02 A:147-217,A:370-405 GROEL, domain 2                            1q2vA03 A:218-369 GroEL                                                                                                                                 1q2vA02 A:147-217,A:370-405         1q2vA01 A:9-146,A:406-526 GROEL, domain 1                                                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeehhhhhhhhhhhhhhhhhhhhhhh.....eeeee.....eeee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhee....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhee....ee.hhh.eeeeeee..hhhhheee..eee...........ee...eeeee..............eee..hhhhhhhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh..ee.hhhhhhhhhhee..eeeeeee..eeeeeee.......eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhh..eeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------TCP1_1       --------TCP1_2           -----------TCP1_3   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1q2v A   9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        


Chain B from PDB  Type:PROTEIN  Length:518
 aligned with THSA_THEK1 | P61112 from UniProtKB/Swiss-Prot  Length:548

    Alignment length:518
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        
           THSA_THEK1     9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
               SCOP domains d1q2vb1 B:9-145,B:406-526 Thermosome, E domain                                                                                           d1q2vb3 B:146-216,B:370-405 Thermosome, I domain                       d1q2vb2 B:217-369 Thermosome, A-domain                                                                                                                   d1q2vb3 B:146-216,B:370-405         d1q2vb1 B:9-145,B:406-526 Thermosome, E domain                                                                            SCOP domains
               CATH domains 1q2vB01 B:9-146,B:406-526 GROEL, domain 1                                                                                                 1q2vB02 B:147-217,B:370-405 GROEL, domain 2                            1q2vB03 B:218-369 GroEL                                                                                                                                 1q2vB02 B:147-217,B:370-405         1q2vB01 B:9-146,B:406-526 GROEL, domain 1                                                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeehhhhhhhhhhhhhhhhhhhhhhh......eeee.....eeee.hhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhee....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhee....ee.hhh.eeeeeee..hhhhheee..eee...........ee..eeeeee............eee....hhhhhhhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh..ee.hhhhhhhhhheee.eeeeeee..eeeeeee.......eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------TCP1_1       --------TCP1_2           -----------TCP1_3   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1q2v B   9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        


Chain B from PDB  Type:PROTEIN  Length:518
 aligned with THSA_THEKO | P61111 from UniProtKB/Swiss-Prot  Length:548

    Alignment length:518
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        
           THSA_THEKO     9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
               SCOP domains d1q2vb1 B:9-145,B:406-526 Thermosome, E domain                                                                                           d1q2vb3 B:146-216,B:370-405 Thermosome, I domain                       d1q2vb2 B:217-369 Thermosome, A-domain                                                                                                                   d1q2vb3 B:146-216,B:370-405         d1q2vb1 B:9-145,B:406-526 Thermosome, E domain                                                                            SCOP domains
               CATH domains 1q2vB01 B:9-146,B:406-526 GROEL, domain 1                                                                                                 1q2vB02 B:147-217,B:370-405 GROEL, domain 2                            1q2vB03 B:218-369 GroEL                                                                                                                                 1q2vB02 B:147-217,B:370-405         1q2vB01 B:9-146,B:406-526 GROEL, domain 1                                                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeehhhhhhhhhhhhhhhhhhhhhhh......eeee.....eeee.hhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhee....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhee....ee.hhh.eeeeeee..hhhhheee..eee...........ee..eeeeee............eee....hhhhhhhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh..ee.hhhhhhhhhheee.eeeeeee..eeeeeee.......eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------TCP1_1       --------TCP1_2           -----------TCP1_3   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1q2v B   9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        


Chain C from PDB  Type:PROTEIN  Length:518
 aligned with THSA_THEK1 | P61112 from UniProtKB/Swiss-Prot  Length:548

    Alignment length:518
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        
           THSA_THEK1     9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
               SCOP domains d1q2vc1 C:9-145,C:406-526 Thermosome, E domain                                                                                           d1q2vc3 C:146-216,C:370-405 Thermosome, I domain                       d1q2vc2 C:217-369 Thermosome, A-domain                                                                                                                   d1q2vc3 C:146-216,C:370-405         d1q2vc1 C:9-145,C:406-526 Thermosome, E domain                                                                            SCOP domains
               CATH domains 1q2vC01 C:9-146,C:406-526 GROEL, domain 1                                                                                                 1q2vC02 C:147-217,C:370-405 GROEL, domain 2                            1q2vC03 C:218-369 GroEL                                                                                                                                 1q2vC02 C:147-217,C:370-405         1q2vC01 C:9-146,C:406-526 GROEL, domain 1                                                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeehhhhhhhhhhhhhhhhhhhhhhh......eeee.....eeee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhee....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhee....ee.hhh.eeeeeee..hhhhheee..eee...........ee..eeeeee............eee....hhhhhhhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh.....hhhhhhhhhheee.eeeeeee..eeeeeee.......eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------TCP1_1       --------TCP1_2           -----------TCP1_3   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1q2v C   9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        


Chain C from PDB  Type:PROTEIN  Length:518
 aligned with THSA_THEKO | P61111 from UniProtKB/Swiss-Prot  Length:548

    Alignment length:518
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        
           THSA_THEKO     9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
               SCOP domains d1q2vc1 C:9-145,C:406-526 Thermosome, E domain                                                                                           d1q2vc3 C:146-216,C:370-405 Thermosome, I domain                       d1q2vc2 C:217-369 Thermosome, A-domain                                                                                                                   d1q2vc3 C:146-216,C:370-405         d1q2vc1 C:9-145,C:406-526 Thermosome, E domain                                                                            SCOP domains
               CATH domains 1q2vC01 C:9-146,C:406-526 GROEL, domain 1                                                                                                 1q2vC02 C:147-217,C:370-405 GROEL, domain 2                            1q2vC03 C:218-369 GroEL                                                                                                                                 1q2vC02 C:147-217,C:370-405         1q2vC01 C:9-146,C:406-526 GROEL, domain 1                                                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeehhhhhhhhhhhhhhhhhhhhhhh......eeee.....eeee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhee....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhee....ee.hhh.eeeeeee..hhhhheee..eee...........ee..eeeeee............eee....hhhhhhhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh.....hhhhhhhhhheee.eeeeeee..eeeeeee.......eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..eeee....eeeehhhhh.eeehhhhhhhhhhhhhhhhhhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------TCP1_1       --------TCP1_2           -----------TCP1_3   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1q2v C   9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        


Chain D from PDB  Type:PROTEIN  Length:518
 aligned with THSA_THEK1 | P61112 from UniProtKB/Swiss-Prot  Length:548

    Alignment length:518
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        
           THSA_THEK1     9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
               SCOP domains d1q2vd1 D:9-145,D:406-526 Thermosome, E domain                                                                                           d1q2vd3 D:146-216,D:370-405 Thermosome, I domain                       d1q2vd2 D:217-369 Thermosome, A-domain                                                                                                                   d1q2vd3 D:146-216,D:370-405         d1q2vd1 D:9-145,D:406-526 Thermosome, E domain                                                                            SCOP domains
               CATH domains 1q2vD01 D:9-146,D:406-526 GROEL, domain 1                                                                                                 1q2vD02 D:147-217,D:370-405 GROEL, domain 2                            1q2vD03 D:218-369 GroEL                                                                                                                                 1q2vD02 D:147-217,D:370-405         1q2vD01 D:9-146,D:406-526 GROEL, domain 1                                                                                 CATH domains
           Pfam domains (1) --------------------------Cpn60_TCP1-1q2vD01 D:35-526                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  Pfam domains (1)
           Pfam domains (2) --------------------------Cpn60_TCP1-1q2vD02 D:35-526                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  Pfam domains (2)
           Pfam domains (3) --------------------------Cpn60_TCP1-1q2vD03 D:35-526                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  Pfam domains (3)
           Pfam domains (4) --------------------------Cpn60_TCP1-1q2vD04 D:35-526                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  Pfam domains (4)
         Sec.struct. author ........eeeehhhhhhhhhhhhhhhhhhhhh.......eeeee.....eeee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhee....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhee....ee.hhh.eeeeeee..hhhhheee..eee...........ee..eeeeee..............eee..hhhhhhhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh.....hhhhhhhhhheee.eeeeeee..eeeeeee.......eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..eeee....eeee......eeehhhhhhhhhhhhhhhhhhhh..eeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -------------------------------TCP1_1       --------TCP1_2           -----------TCP1_3   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1q2v D   9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        


Chain D from PDB  Type:PROTEIN  Length:518
 aligned with THSA_THEKO | P61111 from UniProtKB/Swiss-Prot  Length:548

    Alignment length:518
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518        
           THSA_THEKO     9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
               SCOP domains d1q2vd1 D:9-145,D:406-526 Thermosome, E domain                                                                                           d1q2vd3 D:146-216,D:370-405 Thermosome, I domain                       d1q2vd2 D:217-369 Thermosome, A-domain                                                                                                                   d1q2vd3 D:146-216,D:370-405         d1q2vd1 D:9-145,D:406-526 Thermosome, E domain                                                                            SCOP domains
               CATH domains 1q2vD01 D:9-146,D:406-526 GROEL, domain 1                                                                                                 1q2vD02 D:147-217,D:370-405 GROEL, domain 2                            1q2vD03 D:218-369 GroEL                                                                                                                                 1q2vD02 D:147-217,D:370-405         1q2vD01 D:9-146,D:406-526 GROEL, domain 1                                                                                 CATH domains
           Pfam domains (1) --------------------------Cpn60_TCP1-1q2vD01 D:35-526                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  Pfam domains (1)
           Pfam domains (2) --------------------------Cpn60_TCP1-1q2vD02 D:35-526                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  Pfam domains (2)
           Pfam domains (3) --------------------------Cpn60_TCP1-1q2vD03 D:35-526                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  Pfam domains (3)
           Pfam domains (4) --------------------------Cpn60_TCP1-1q2vD04 D:35-526                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  Pfam domains (4)
         Sec.struct. author ........eeeehhhhhhhhhhhhhhhhhhhhh.......eeeee.....eeee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhee....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhee....ee.hhh.eeeeeee..hhhhheee..eee...........ee..eeeeee..............eee..hhhhhhhhhhhhhhhhhhhhhhhhh...eeee....hhhhhhhhhhh..eee...hhhhhhhhhhhhh.....hhhhhhhhhheee.eeeeeee..eeeeeee.......eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..eeee....eeee......eeehhhhhhhhhhhhhhhhhhhh..eeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------TCP1_1       --------TCP1_2           -----------TCP1_3   --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1q2v D   9 VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKA 526
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 12)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (3, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 2-Layer Sandwich (8480)
(-)
Topology: GROEL; domain 2 (26)
(-)
Homologous Superfamily: GROEL, domain 2 (26)
(-)
Ks-1 (Thermococcus sp) (4)
1a1q2vA02A:147-217,A:370-405
1b1q2vB02B:147-217,B:370-405
1c1q2vC02C:147-217,C:370-405
1d1q2vD02D:147-217,D:370-405
(-)
Architecture: 3-Layer(bba) Sandwich (528)
(-)
Topology: GroEL (39)
(-)
Homologous Superfamily: GroEL (39)
(-)
Ks-1 (Thermococcus sp) (4)
2a1q2vA03A:218-369
2b1q2vB03B:218-369
2c1q2vC03C:218-369
2d1q2vD03D:218-369
(-)
Class: Mainly Alpha (13335)
(-)
Architecture: Orthogonal Bundle (10391)
(-)
Topology: GROEL; domain 1 (26)
(-)
Homologous Superfamily: GROEL, domain 1 (26)
(-)
Ks-1 (Thermococcus sp) (4)
3a1q2vA01A:9-146,A:406-526
3b1q2vB01B:9-146,B:406-526
3c1q2vC01C:9-146,C:406-526
3d1q2vD01D:9-146,D:406-526

(-) Pfam Domains  (1, 4)

Asymmetric Unit
(-)
Clan: no clan defined [family: Cpn60_TCP1] (28)

(-) Gene Ontology  (4, 8)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (THSA_THEKO | P61111)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0051082    unfolded protein binding    Interacting selectively and non-covalently with an unfolded protein.
biological process
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

Chain A,B,C,D   (THSA_THEK1 | P61112)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0051082    unfolded protein binding    Interacting selectively and non-covalently with an unfolded protein.
biological process
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

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  1q2v
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  THSA_THEK1 | P61112
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  THSA_THEKO | P61111
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    Protein-protein Interaction: DIP
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  3.6.4.9
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  THSA_THEK1 | P61112
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  THSA_THEKO | P61111
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        THSA_THEK1 | P61112: 1q3q 1q3r 1q3s
        THSA_THEKO | P61111: 1q3q 1q3r 1q3s

(-) Related Entries Specified in the PDB File

1q3q TWO-POINT MUTANT (G65C/I125T) COMPLEXED WITH AMP-PNP
1q3r SINGLE MUTANT (I125T) WITHOUT NUCLEOTIDE
1q3s FORM III CRYSTAL OF SINGLE MUTANT (G65C) COMPLEXED WITH ADP