Chain A from PDB Type:PROTEIN Length:315
aligned with SDHL_RAT | P09367 from UniProtKB/Swiss-Prot Length:363
Alignment length:351
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355
SDHL_RAT 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCSSVVQIWGSRMRGRSHSGDEQPHVRSQALLPDTPSPLTAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEGRLQTPLASLVVIVCGGSNISLAQLQALKAQL 356
SCOP domains d1pwea_ A: L-serine dehydratase SCOP domains
CATH domains 1pweA01 A:6-43,A:136-320 1pweA02 A:44-135 [c ode=3.40.50.1100, no name defined] 1pweA01 A:6-43,A:136-320 [code=3.40.50.1100, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeehhhhhhhhh..eeee.hhhh.....hhhhhhhhhhhhhhh...eeee.------------------------------------..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeee...hhhhhhhhhhhhhhhh..eee.....hhhhhhhhhhhhhhhhhhh......eeee...hhhhhhhhhhhhhhh.....eeeeee..................hhhhhhhhhhh..hhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.........eeee.......hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------DEHYDRATASE_SE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pwe A 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCS------------------------------------SAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEARLQTPLASLVVIVCGGSNISLAQLQALKAQL 320
15 25 35 45 55 | - - - - | 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319
63 64
Chain B from PDB Type:PROTEIN Length:315
aligned with SDHL_RAT | P09367 from UniProtKB/Swiss-Prot Length:363
Alignment length:351
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355
SDHL_RAT 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCSSVVQIWGSRMRGRSHSGDEQPHVRSQALLPDTPSPLTAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEGRLQTPLASLVVIVCGGSNISLAQLQALKAQL 356
SCOP domains d1pweb_ B: L-serine dehydratase SCOP domains
CATH domains 1pweB01 B:6-43,B:136-320 1pweB02 B:44-135 [c ode=3.40.50.1100, no name defined] 1pweB01 B:6-43,B:136-320 [code=3.40.50.1100, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeehhhhhhhh..eeee.hhhh.....hhhhhhhhhhhhhhh...eeee.------------------------------------..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeee...hhhhhhhhhhhhhhhh..eee.....hhhhhhh.hhhhhhhhhhh......eeee...hhhhhhhhhhhhhhh.....eeeeee..................hhhhhhhhhhh..hhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.........eeee.......hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------DEHYDRATASE_SE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pwe B 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCS------------------------------------SAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEARLQTPLASLVVIVCGGSNISLAQLQALKAQL 320
15 25 35 45 55 | - - - - | 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319
63 64
Chain C from PDB Type:PROTEIN Length:315
aligned with SDHL_RAT | P09367 from UniProtKB/Swiss-Prot Length:363
Alignment length:351
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355
SDHL_RAT 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCSSVVQIWGSRMRGRSHSGDEQPHVRSQALLPDTPSPLTAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEGRLQTPLASLVVIVCGGSNISLAQLQALKAQL 356
SCOP domains d1pwec_ C: L-serine dehydratase SCOP domains
CATH domains 1pweC01 C:6-43,C:136-320 1pweC02 C:44-135 [c ode=3.40.50.1100, no name defined] 1pweC01 C:6-43,C:136-320 [code=3.40.50.1100, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeehhhhhhhhh..eeee.hhhh.....hhhhhhhhhhhhhhh...eeee.------------------------------------..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeee...hhhhhhhhhhhhhhhh..eee.....hhhhhhh.hhhhhhhhhhh......eeee...hhhhhhhhhhhhhhh.....eeeeee..................hhhhhhhhhhh..hhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.........eeee.......hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------DEHYDRATASE_SE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pwe C 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCS------------------------------------SAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEARLQTPLASLVVIVCGGSNISLAQLQALKAQL 320
15 25 35 45 55 | - - - - | 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319
63 64
Chain D from PDB Type:PROTEIN Length:315
aligned with SDHL_RAT | P09367 from UniProtKB/Swiss-Prot Length:363
Alignment length:351
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355
SDHL_RAT 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCSSVVQIWGSRMRGRSHSGDEQPHVRSQALLPDTPSPLTAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEGRLQTPLASLVVIVCGGSNISLAQLQALKAQL 356
SCOP domains d1pwed_ D: L-serine dehydratase SCOP domains
CATH domains 1pweD01 D:6-43,D:136-320 1pweD02 D:44-135 [c ode=3.40.50.1100, no name defined] 1pweD01 D:6-43,D:136-320 [code=3.40.50.1100, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeehhhhhhhhh..eeee.hhhh.....hhhhhhhhhhhhhhh...eeee.------------------------------------..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeee...hhhhhhhhhhhhhhhh..eee.....hhhhhhh.hhhhhhhhhhh......eeee...hhhhhhhhhhhhhhh.....eeeeee..................hhhhhhhhhhh..hhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.........eeee.......hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------DEHYDRATASE_SE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pwe D 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCS------------------------------------SAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEARLQTPLASLVVIVCGGSNISLAQLQALKAQL 320
15 25 35 45 55 | - - - - | 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319
63 64
Chain E from PDB Type:PROTEIN Length:315
aligned with SDHL_RAT | P09367 from UniProtKB/Swiss-Prot Length:363
Alignment length:351
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355
SDHL_RAT 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCSSVVQIWGSRMRGRSHSGDEQPHVRSQALLPDTPSPLTAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEGRLQTPLASLVVIVCGGSNISLAQLQALKAQL 356
SCOP domains d1pwee_ E: L-serine dehydratase SCOP domains
CATH domains 1pweE01 E:6-43,E:136-320 1pweE02 E:44-135 [c ode=3.40.50.1100, no name defined] 1pweE01 E:6-43,E:136-320 [code=3.40.50.1100, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeehhhhhhhhh..eeee.hhhh.....hhhhhhhhhhhhhhh...eeee.------------------------------------..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeee...hhhhhhhhhhhhhhhh..eee.....hhhhhhhhhhhhhhhhhhh......eeee...hhhhhhhhhhhhhhh.....eeeeee..................hhhhhhhhhhh..hhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.........eeee.......hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------DEHYDRATASE_SE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pwe E 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCS------------------------------------SAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEARLQTPLASLVVIVCGGSNISLAQLQALKAQL 320
15 25 35 45 55 | - - - - | 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319
63 64
Chain F from PDB Type:PROTEIN Length:315
aligned with SDHL_RAT | P09367 from UniProtKB/Swiss-Prot Length:363
Alignment length:351
15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355
SDHL_RAT 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCSSVVQIWGSRMRGRSHSGDEQPHVRSQALLPDTPSPLTAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEGRLQTPLASLVVIVCGGSNISLAQLQALKAQL 356
SCOP domains d1pwef_ F: L-serine dehydratase SCOP domains
CATH domains 1pweF01 F:6-43,F:136-320 1pweF02 F:44-135 [c ode=3.40.50.1100, no name defined] 1pweF01 F:6-43,F:136-320 [code=3.40.50.1100, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeehhhhhhhhh..eeee.hhhh.....hhhhhhhhhhhhhhh...eeee.------------------------------------..hhhhhhhhhhhhhh...eeeee....hhhhhhhhhh...eeee...hhhhhhhhhhhhhhhh..eeee....hhhhhhh.hhhhhhhhhhh......eeee...hhhhhhhhhhhhhhh.....eeeeee..................hhhhhhhhhhh..hhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.........eeee.......hhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------DEHYDRATASE_SE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pwe F 6 SLHVKTPLRDSMALSKVAGTSVFLKMDSSQPSGSFKIRGIGHLCKMKAKQGCKHFVCS------------------------------------SAGNAGMATAYAARRLGLPATIVVPSTTPALTIERLKNEGATVEVVGEMLDEAIQLAKALEKNNPGWVYISPFDDPLIWEGHTSLVKELKETLSAKPGAIVLSVGGGGLLCGVVQGLREVGWEDVPIIAMETFGAHSFHAAVKEGKLVTLPKITSVAKALGVNTVGAQTLKLFYEHPIFSEVISDQEAVTAIEKFVDDEKILVEPACGAALAAVYSGVVCRLQAEARLQTPLASLVVIVCGGSNISLAQLQALKAQL 320
15 25 35 45 55 | - - - - | 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239 249 259 269 279 289 299 309 319
63 64
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |