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(-) Description

Title :  X-RAY CRYSTAL STRUCTURE OF PROTEIN SPYM3_0169 FROM STREPTOCOCCUS PYOGENES. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET DR2.
 
Authors :  A. Kuzin, I. Lee, W. Edstrom, R. Xiao, T. Acton, B. Rost, G. Montelione, J L. Tong, Northeast Structural Genomics Consortium (Nesg)
Date :  27 May 03  (Deposition) - 02 Dec 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (3x)
Keywords :  Structural Genomics; Streptococcus Pyogenes; Spym3_0169, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Kuzin, I. Lee, W. Edstrom, R. Xiao, T. Acton, B. Rost, G. Montelione, J. Hunt, L. Tong
X-Ray Structure Of Hypothetical Protein Spym3_0169 From Streptococcus Pyogenes
To Be Published 2003
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN SPYM3_0169
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: SPS0176
    Organism Scientific: STREPTOCOCCUS PYOGENES
    Organism Taxid: 186103
    Other Details: ALL METHIONINES MODIFIED TO SEMET
    Strain: MGAS8232
    Synonym: HYPOTHETICAL PROTEIN SPYM18_0222

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric Unit (2, 12)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
2MSE10Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 10)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MSE10Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 30)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2MSE30Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPRO A:90 , THR A:92 , ASN A:154 , SER A:155 , HOH A:305BINDING SITE FOR RESIDUE CA A 237
2AC2SOFTWAREGLY A:34 , MSE A:36 , ASP A:172 , GLU A:201 , HOH A:302 , HOH A:304BINDING SITE FOR RESIDUE CA A 238

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1PG6)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1PG6)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1PG6)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 1PG6)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:216
                                                                                                                                                                                                                                                        
               SCOP domains d1pg6a_ A: Hypothetical protein SPyM3_0169 (SPyM18_0222, SPS0176)                                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeee........eeeee....eeeee...eeee...eeee........hhhhhhhhhhhh....eeeeee...eeeee.......eeeeee....eeee...eeeee...eeeeee.......eeeeee..eeeeee....eeeeeeeeeeeeee...eeeee...eeeee...hhhhhhhhh...eeeeeeeeeeeee..hhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1pg6 A   5 RmRFTIDQNmQFPLVEIDLEHGGSVYLQQGSmVYHTENVTLNTKLNGLGKLVGAIGRSmVSGESmFITQAmSNGDGKLALAPNTPGQIVALELGEKQYRLNDGAFLALDGSAQYKmERQNIGGGLFVmTTEGLGTLLANSFGSIKKITLDGGTmTIDNAHVVAWSRELDYDIHLENGFmQSIGTGEGVVNTFRGHGEIYIQSLNLEQFAGTLKRYL 231
                             |      14        24        34 |      44     || 58        68    |   78|       88        98       108       118     | 128 ||    145       155       165   |   175       185       195       205       215       225      
                             |      14-MSE                36-MSE        50|          67-MSE |     |                                          124-MSE30|    |                       169-MSE                  194-MSE                                 
                             6-MSE                                       55                73-MSE |                                                 138    |                                                                                        
                                                                                                 79-MSE                                                  143-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1PG6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1PG6)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1PG6)

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