No.	Name	Count	Type	Full Name
1	HEM	2	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
2	TBU	4	Ligand/Ion	TERTIARY-BUTYL ALCOHOL
3	TRW	1	Mod. Amino Acid	TRW3-(2-AMINO-3-HYDROXY-PROPYL)-6-(N'-CYCLOHEXYL-HYDRAZINO)OCTAHYDRO-INDOL-7-OL

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ALA A:10 , CYS A:11 , CYS A:14 , HIS A:15 , ARG A:25 , ILE A:26 , TRP A:36 , THR A:39 , ARG A:42 , MET A:43 , HIS A:47 , VAL A:49 , ARG A:114 , PHE A:125 , HEM A:992 , HOH A:2001 , HOH A:2007 , LEU B:107 , THR B:108 , HIS B:109	BINDING SITE FOR RESIDUE HEM A 991
2	AC2	SOFTWARE	LYS A:31 , THR A:39 , ARG A:42 , ARG A:45 , THR A:99 , CYS A:100 , ARG A:102 , CYS A:103 , HIS A:104 , ARG A:108 , VAL A:109 , GLN A:112 , ARG A:114 , LEU A:122 , HIS A:126 , PHE A:130 , LEU A:133 , GLN A:136 , HEM A:991 , HOH A:1999 , HOH A:2008 , HOH A:2030 , HOH A:2176 , PRO C:44 , HOH C:80	BINDING SITE FOR RESIDUE HEM A 992
3	AC3	SOFTWARE	GLY A:236 , GLU B:162	BINDING SITE FOR RESIDUE TBU A 1993
4	AC4	SOFTWARE	HOH A:2412 , ARG B:128	BINDING SITE FOR RESIDUE TBU A 1994
5	AC5	SOFTWARE	SER A:303 , GLU A:316 , ALA A:318 , ILE B:209 , ASP B:213	BINDING SITE FOR RESIDUE TBU B 1995
6	AC6	SOFTWARE	GLU B:132 , HOH B:2247 , HOH B:2456	BINDING SITE FOR RESIDUE TBU B 1996

No.	Residues
1	Ala A:282	-	Pro A:283
2	Val A:359	-	Pro A:360
3	Arg B:9	-	Pro B:10
4	Gly B:33	-	Pro B:34
5	Asp C:12	-	Pro C:13
6	Gln C:28	-	Pro C:29

Reformat:	Number of residues per line =  ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete  aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:489
 aligned with Q8VUT0_PARDE | Q8VUT0 from UniProtKB/TrEMBL  Length:512

    Alignment length:489
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503         
         Q8VUT0_PARDE    24 VTGEEVLQNACAACHVQHEDGRWERIDAARKTPEGWDMTVTRMMRNHGVALEPEERAAIVRHLSDTRGLSLAETEERRYILEREPVAWDEGPDTSMTQTCGRCHSYARVALQRRTPEDWKHLVNFHLGQFPTLEYQALARDRDWWGIAQAEIIPFLARTYPLGEAPDAYADDASGAYVLAGRQPGRGDYTGRLVLKKAGEDYEVTMTLDFADGSRSFSGTGRILGAGEWRATLSDGTVTIRQIFALQDGRFSGRWHDADSDVIGGRLAAVKADAAPQVLAVAPARLKIGEETQLRVAGTGLGSDLTLPEGVAGSVESAGNGVTVLKLTATGTPGPVSLELGGQKVDLVAYDRPDRISIVPDLTIARIGGNGGPIPKVPAQFEAMGWLNGPDGQPGTGDDIALGAFPASWATDNFDEEAEKMQDAKYAGSIDDTGLFTPAEAGPNPERPMQTNNAGNLKVIATVDAEGEPLSAEAHLYATVQRFVDAPIR 512
               SCOP domains d1pbya1 A:1-85 Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2         d1pbya2 A:86-165 Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2  d1pbya5 A:166-273 Quinohemoprotein amine dehydrogenase A chain, domain 3                                    d1pbya3 A:274-351                                                             d1pbya4 A:352-489 Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------1pbyA02 A:169-274 Quinohemoprotein amine dehydrogenase                                                    1pbyA03 A:275-350 Immunoglobulins                                           1pbyA04 A:351-481 Immunoglobulins                                                                                                  -------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------Dehyd-heme_bind-1pbyA01 A:97-164                                    --------------------------------------------------------------------------------------------------------------DUF1927-1pbyA02 A:275-351                                                    ----DUF1928-1pbyA03 A:356-488                                                                                                            - Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh..........hhh.eeehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh...hhhhh.hhhhhhh.........hhhhhhhhh....hhhhhheeehhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh..............eeeeeeeee...eeeeeeeeeeee..eeeeeeeee....eeeeeeeeeee...eeeeeeee..eeeeeeeeee..eeeeeeee..eeeeeeeeeeee.....eeeeee..eee....eeeeeeee.....ee....eeeeeee....eeeeeeee....eeeeeee..eeeeeeee....eeeee..eeeee............ee.eeeeee............eeeeee..eeeeee.hhhhhhhhhhhhheee....eeee........hhhhh...eeeeeeee........eeeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1pby A   1 VTGEEVLQNACAACHVQHEDGRWERIDAARKTPEGWDMTVTRMMRNHGVALEPEERAAIVRHLSDTRGLSLAETEERRYILEREPVAWDEGPDTSMTQTCGRCHSYARVALQRRTPEDWKHLVNFHLGQFPTLEYQALARDRDWWGIAQAEIIPFLARTYPLGEAPDAYADDASGAYVLAGRQPGRGDYTGRLVLKKAGEDYEVTMTLDFADGSRSFSGTGRILGAGEWRATLSDGTVTIRQIFALQDGRFSGRWHDADSDVIGGRLAAVKADAAPQVLAVAPARLKIGEETQLRVAGTGLGSDLTLPEGVAGSVESAGNGVTVLKLTATGTPGPVSLELGGQKVDLVAYDRPDRISIVPDLTIARIGGNGGPIPKVPAQFEAMGWLNGPDGQPGTGDDIALGAFPASWATDNFDEEAEKMQDAKYAGSIDDTGLFTPAEAGPNPERPMQTNNAGNLKVIATVDAEGEPLSAEAHLYATVQRFVDAPIR 489
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480         

Chain B from PDB  Type:PROTEIN  Length:337
 aligned with Q8VUS7_PARDE | Q8VUS7 from UniProtKB/TrEMBL  Length:358

    Alignment length:337
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       
         Q8VUS7_PARDE    22 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRDE 358
               SCOP domains d1pbyb_ B: Quinohemoprotein amine dehydrogenase B chain                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains 1pbyB00 B:1-337 YVTN repeat-like/Quinoprotein amine dehydrogenase                                                                                                                                                                                                                                                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee...eeeeee....eeeeeee..........eee.....eeeeee....eeeeee.....eeeeee.....eeee....eee.....eeeeeeeeeee....eee...eeeeee....eeeeeee.......eee......eeee...eeeee....eeeeee..........................eeeeeeeee.......hhh.eeeeeeeee.....eeeeeeee......eeee.....eeeee..eeeeee....eeeeeee......eeee.....eeeee....eeeeee.....eeeeee.hhhh.......eeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1pby B   1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRDE 337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       

Chain C from PDB  Type:PROTEIN  Length:79
 aligned with QADG_PARDE | Q8VUS8 from UniProtKB/Swiss-Prot  Length:82

    Alignment length:79
                                    10        20        30        40        50        60        70         
           QADG_PARDE     1 MNALVGCTTSFDPGWEVDAFGAVSNLCQPMEADLYGCADPCWWPAQVADTLNTYPNWSAGADDVMQDWRKLQSVFPETK  79
               SCOP domains d1pbyc_ C: Quinohemoprotein amine dehydrogenase C chain                         SCOP domains
               CATH domains 1pbyC00 C:1-79 Quinohemoprotein amine dehydrogenase                             CATH domains
               Pfam domains -QH-AmDH_gamma-1pbyC01 C:2-79                                                   Pfam domains
         Sec.struct. author .............................hhhhhhhhhh.......................hhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 1pby C   1 MNALVGCTTSFDPGWEVDAFGAVSNLCQPMEADLYGCADPCWwPAQVADTLNTYPNWSAGADDVMQDWRKLQSVFPETK  79
                                    10        20        30        40  |     50        60        70         
                                                                     43-TRW                                

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'