1P1R - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED WITH NADH AND R-N-1-METHYLHEXYLFORMAMIDE

Authors :   T. H. Venkataramaiah, B. V. Plapp

Date :   13 Apr 03 (Deposition) - 15 Jul 03 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.57

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Puckered Reduced Nicotinamide Ring, Michaelis Complex Analogue, Formamide, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. H. Venkataramaiah, B. V. Plapp
Formamides Mimic Aldehydes And Inhibit Liver Alcohol Dehydrogenases And Ethanol Metabolism
J. Biol. Chem. V. 278 36699 2003
PubMed-ID: 12855684 | Reference-DOI: 10.1074/JBC.M305419200
(for further references see the PDB file header)

Molecule 1 - ALCOHOL DEHYDROGENASE E CHAIN
	Chains	:	A, B, C, D
	EC Number	:	1.1.1.1
	Organ	:	LIVER
	Organism Common	:	HORSE
	Organism Scientific	:	EQUUS CABALLUS
	Organism Taxid	:	9796

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 17)

No.	Name	Count	Type	Full Name
1	MPD	1	Ligand/Ion	(4S)-2-METHYL-2,4-PENTANEDIOL
2	NAI	4	Ligand/Ion	1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
3	NMH	4	Ligand/Ion	(R)-N-(1-METHYL-HEXYL)-FORMAMIDE
4	ZN	8	Ligand/Ion	ZINC ION

Biological Unit 1 (3, 5)

No.	Name	Count	Type	Full Name
1	MPD	1	Ligand/Ion	(4S)-2-METHYL-2,4-PENTANEDIOL
2	NAI	2	Ligand/Ion	1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
3	NMH	2	Ligand/Ion	(R)-N-(1-METHYL-HEXYL)-FORMAMIDE
4	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (2, 4)

No.	Name	Count	Type	Full Name
1	MPD	-1	Ligand/Ion	(4S)-2-METHYL-2,4-PENTANEDIOL
2	NAI	2	Ligand/Ion	1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
3	NMH	2	Ligand/Ion	(R)-N-(1-METHYL-HEXYL)-FORMAMIDE
4	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (17, 17)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	CYS A:46 , HIS A:67 , CYS A:174 , NAI A:377 , NMH A:378	BINDING SITE FOR RESIDUE ZN A 375
02	AC2	SOFTWARE	CYS A:97 , CYS A:100 , CYS A:103 , CYS A:111	BINDING SITE FOR RESIDUE ZN A 376
03	AC3	SOFTWARE	CYS B:46 , HIS B:67 , CYS B:174 , NAI B:377 , NMH B:378	BINDING SITE FOR RESIDUE ZN B 375
04	AC4	SOFTWARE	CYS B:97 , CYS B:100 , CYS B:103 , CYS B:111	BINDING SITE FOR RESIDUE ZN B 376
05	AC5	SOFTWARE	CYS C:46 , HIS C:67 , CYS C:174 , NAI C:377 , NMH C:378	BINDING SITE FOR RESIDUE ZN C 375
06	AC6	SOFTWARE	CYS C:97 , CYS C:100 , CYS C:103 , CYS C:111	BINDING SITE FOR RESIDUE ZN C 376
07	AC7	SOFTWARE	CYS D:46 , HIS D:67 , CYS D:174 , NAI D:377 , NMH D:378	BINDING SITE FOR RESIDUE ZN D 375
08	AC8	SOFTWARE	CYS D:97 , CYS D:100 , CYS D:103 , CYS D:111	BINDING SITE FOR RESIDUE ZN D 376
09	AC9	SOFTWARE	ARG A:47 , SER A:48 , HIS A:51 , CYS A:174 , THR A:178 , GLY A:199 , GLY A:201 , GLY A:202 , VAL A:203 , ASP A:223 , ILE A:224 , VAL A:268 , ILE A:269 , ARG A:271 , VAL A:292 , GLY A:293 , VAL A:294 , ALA A:317 , ILE A:318 , PHE A:319 , ARG A:369 , ZN A:375 , NMH A:378 , HOH A:7025 , HOH A:7045 , HOH A:7046 , HOH A:7155 , HOH A:7218 , HOH A:8024	BINDING SITE FOR RESIDUE NAI A 377
10	BC1	SOFTWARE	CYS A:46 , SER A:48 , LEU A:57 , HIS A:67 , PHE A:93 , LEU A:116 , CYS A:174 , VAL A:294 , ILE A:318 , ZN A:375 , NAI A:377 , LEU B:309	BINDING SITE FOR RESIDUE NMH A 378
11	BC2	SOFTWARE	ARG B:47 , SER B:48 , HIS B:51 , CYS B:174 , THR B:178 , GLY B:199 , GLY B:201 , GLY B:202 , VAL B:203 , ASP B:223 , ILE B:224 , VAL B:268 , ILE B:269 , ARG B:271 , VAL B:292 , GLY B:293 , VAL B:294 , ALA B:317 , ILE B:318 , PHE B:319 , ARG B:369 , ZN B:375 , NMH B:378 , HOH B:7727 , HOH B:7747 , HOH B:7748 , HOH B:7875 , HOH B:7891 , HOH B:7915 , HOH B:7923	BINDING SITE FOR RESIDUE NAI B 377
12	BC3	SOFTWARE	LEU A:309 , CYS B:46 , SER B:48 , HIS B:67 , PHE B:93 , LEU B:116 , CYS B:174 , VAL B:294 , ILE B:318 , ZN B:375 , NAI B:377	BINDING SITE FOR RESIDUE NMH B 378
13	BC4	SOFTWARE	ARG C:47 , SER C:48 , HIS C:51 , CYS C:174 , THR C:178 , GLY C:199 , GLY C:201 , GLY C:202 , VAL C:203 , ASP C:223 , ILE C:224 , VAL C:268 , ILE C:269 , ARG C:271 , VAL C:292 , GLY C:293 , VAL C:294 , ALA C:317 , ILE C:318 , PHE C:319 , ARG C:369 , ZN C:375 , NMH C:378 , HOH C:7256 , HOH C:7260 , HOH C:7277 , HOH C:7278 , HOH C:7391 , HOH C:7462 , HOH C:8104	BINDING SITE FOR RESIDUE NAI C 377
14	BC5	SOFTWARE	CYS C:46 , SER C:48 , HIS C:67 , PHE C:93 , LEU C:116 , CYS C:174 , VAL C:294 , ILE C:318 , ZN C:375 , NAI C:377 , LEU D:309	BINDING SITE FOR RESIDUE NMH C 378
15	BC6	SOFTWARE	ARG D:47 , SER D:48 , HIS D:51 , CYS D:174 , THR D:178 , GLY D:199 , GLY D:201 , GLY D:202 , VAL D:203 , ASP D:223 , ILE D:224 , LYS D:228 , VAL D:268 , ILE D:269 , ARG D:271 , VAL D:292 , GLY D:293 , VAL D:294 , ALA D:317 , ILE D:318 , PHE D:319 , ARG D:369 , ZN D:375 , NMH D:378 , HOH D:7501 , HOH D:7521 , HOH D:7522 , HOH D:7645 , HOH D:7660 , HOH D:7664 , HOH D:7683 , HOH D:7687	BINDING SITE FOR RESIDUE NAI D 377
16	BC7	SOFTWARE	MET C:306 , LEU C:309 , CYS D:46 , SER D:48 , HIS D:67 , PHE D:93 , LEU D:116 , CYS D:174 , VAL D:294 , ZN D:375 , NAI D:377	BINDING SITE FOR RESIDUE NMH D 378
17	BC8	SOFTWARE	ARG B:218 , GLU B:239 , ARG C:218 , THR C:238 , GLU C:239	BINDING SITE FOR RESIDUE MPD B 2001

(no "SS Bond" information available for 1P1R)

Asymmetric Unit

No.	Residues
1	Leu A:61	-	Pro A:62
2	Leu B:61	-	Pro B:62
3	Leu C:61	-	Pro C:62
4	Leu D:61	-	Pro D:62

(no "SAP(SNP)/Variant" information available for 1P1R)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADH_ZINC	PS00059	Zinc-containing alcohol dehydrogenases signature.	ADH1E_HORSE	67-81	4	A:66-80 B:66-80 C:66-80 D:66-80

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADH_ZINC	PS00059	Zinc-containing alcohol dehydrogenases signature.	ADH1E_HORSE	67-81	2	A:66-80 B:66-80 - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ADH_ZINC	PS00059	Zinc-containing alcohol dehydrogenases signature.	ADH1E_HORSE	67-81	2	- - C:66-80 D:66-80

(no "Exon" information available for 1P1R)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:374
 aligned with ADH1E_HORSE | P00327 from UniProtKB/Swiss-Prot  Length:375

    Alignment length:374
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371    
          ADH1E_HORSE     2 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 375
               SCOP domains d1p1ra1 A:1-163,A:340-374 Alcohol dehydrogenase                                                                                                                    d1p1ra2 A:164-339 Alcohol dehydrogenase                                                                                                                                         d1p1ra1 A:1-163,A:340-374           SCOP domains
               CATH domains 1p1rA01 A:1-178,A:318-374 Medium-chain alcohol dehydrogenases, catalytic domain                                                                                                   1p1rA02 A:179-317 NAD(P)-binding Rossmann-like Domain                                                                                      1p1rA01 A:1-178,A:318-374                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeee.......eeeeeee......eeeeeeeeee.hhhhhhhhh........ee....eeeeeeee...........eeee........hhhhhh........................eee..eee...........eeeee...eee.....hhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhh..eeehhhhh..hhhhhhhhhh.....eeee...hhhhhhhhhhhh.....eeee.........eee.hhhhhh..eeee.hhhhhhhhhhhhhhhhhhhh....hhh.eeeeee..hhhhhhhhhhh....eeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------ADH_ZINC       ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1p1r A   1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370

Chain B from PDB  Type:PROTEIN  Length:374
 aligned with ADH1E_HORSE | P00327 from UniProtKB/Swiss-Prot  Length:375

    Alignment length:374
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371    
          ADH1E_HORSE     2 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 375
               SCOP domains d1p1rb1 B:1-163,B:340-374 Alcohol dehydrogenase                                                                                                                    d1p1rb2 B:164-339 Alcohol dehydrogenase                                                                                                                                         d1p1rb1 B:1-163,B:340-374           SCOP domains
               CATH domains 1p1rB01 B:1-178,B:318-374 Medium-chain alcohol dehydrogenases, catalytic domain                                                                                                   1p1rB02 B:179-317 NAD(P)-binding Rossmann-like Domain                                                                                      1p1rB01 B:1-178,B:318-374                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeee........eeeeeee......eeeeeeeeee.hhhhhhhhhh.............eeeeeeee...........eeee........hhhhhh........................eee..eee...........eeeee...eee.....hhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhh..eeehhhhh..hhhhhhhhhh.....eeee...hhhhhhhhhhhh.....eeee.........eee.hhhhhh..eeee.hhhhhhhhhhhhhhhhhhhh....hhh.eeeeee..hhhhhhhhhhh....eeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------ADH_ZINC       ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1p1r B   1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370

Chain C from PDB  Type:PROTEIN  Length:374
 aligned with ADH1E_HORSE | P00327 from UniProtKB/Swiss-Prot  Length:375

    Alignment length:374
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371    
          ADH1E_HORSE     2 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 375
               SCOP domains d1p1rc1 C:1-163,C:340-374 Alcohol dehydrogenase                                                                                                                    d1p1rc2 C:164-339 Alcohol dehydrogenase                                                                                                                                         d1p1rc1 C:1-163,C:340-374           SCOP domains
               CATH domains 1p1rC01 C:1-178,C:318-374 Medium-chain alcohol dehydrogenases, catalytic domain                                                                                                   1p1rC02 C:179-317 NAD(P)-binding Rossmann-like Domain                                                                                      1p1rC01 C:1-178,C:318-374                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeee........eeeeeee......eeeeeeeeee.hhhhhhhhhh.............eeeeeeee...........eeee........hhhhhh........................eee..eee...........eeeee...eee.....hhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhh...eeehhhhh..hhhhhhhhhh.....eeee...hhhhhhhhhhhh.....eeee.........eee.hhhhhh..eeee.hhhhhhhhhhhhhhhhhhhh....hhh.eeeeee..hhhhhhhhhhh....eeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------ADH_ZINC       ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1p1r C   1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370

Chain D from PDB  Type:PROTEIN  Length:374
 aligned with ADH1E_HORSE | P00327 from UniProtKB/Swiss-Prot  Length:375

    Alignment length:374
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371    
          ADH1E_HORSE     2 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 375
               SCOP domains d1p1rd1 D:1-163,D:340-374 Alcohol dehydrogenase                                                                                                                    d1p1rd2 D:164-339 Alcohol dehydrogenase                                                                                                                                         d1p1rd1 D:1-163,D:340-374           SCOP domains
               CATH domains 1p1rD01 D:1-178,D:318-374 Medium-chain alcohol dehydrogenases, catalytic domain                                                                                                   1p1rD02 D:179-317 NAD(P)-binding Rossmann-like Domain                                                                                      1p1rD01 D:1-178,D:318-374                                 CATH domains
           Pfam domains (1) --------------------------------ADH_N-1p1rD01 D:33-160                                                                                                          -----------------------------------------ADH_zinc_N-1p1rD05 D:202-337                                                                                                            ------------------------------------- Pfam domains (1)
           Pfam domains (2) --------------------------------ADH_N-1p1rD02 D:33-160                                                                                                          -----------------------------------------ADH_zinc_N-1p1rD06 D:202-337                                                                                                            ------------------------------------- Pfam domains (2)
           Pfam domains (3) --------------------------------ADH_N-1p1rD03 D:33-160                                                                                                          -----------------------------------------ADH_zinc_N-1p1rD07 D:202-337                                                                                                            ------------------------------------- Pfam domains (3)
           Pfam domains (4) --------------------------------ADH_N-1p1rD04 D:33-160                                                                                                          -----------------------------------------ADH_zinc_N-1p1rD08 D:202-337                                                                                                            ------------------------------------- Pfam domains (4)
         Sec.struct. author ......eeeeeee........eeeeeee......eeeeeeeeee.hhhhhhhhh..............eeeeeeee...........eeee........hhhhhh........................eee..eee...........eeeee...eee.....hhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhh..eeehhhhh..hhhhhhhhhh.....eeee...hhhhhhhhhhhh.....eeee.........eee.hhhhhh..eeee.hhhhhhhhhhhhhhhhhhhh....hhh.eeeeee..hhhhhhhhhhh....eeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------ADH_ZINC       ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1p1r D   1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: GroES-like (132)

Superfamily: GroES-like (130)

Family: Alcohol dehydrogenase-like, N-terminal domain (114)

Protein domain: Alcohol dehydrogenase (77)

Horse (Equus caballus) [TaxId: 9796] (40)

1a	d1p1ra1	A:1-163,A:340-374
1b	d1p1rb1	B:1-163,B:340-374
1c	d1p1rc1	C:1-163,C:340-374
1d	d1p1rd1	D:1-163,D:340-374

Class: Alpha and beta proteins (a/b) (23833)

Fold: NAD(P)-binding Rossmann-fold domains (1604)

Superfamily: NAD(P)-binding Rossmann-fold domains (1604)

Family: Alcohol dehydrogenase-like, C-terminal domain (115)

Protein domain: Alcohol dehydrogenase (77)

Horse (Equus caballus) [TaxId: 9796] (40)

2a	d1p1ra2	A:164-339
2b	d1p1rb2	B:164-339
2c	d1p1rc2	C:164-339
2d	d1p1rd2	D:164-339

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)

Horse (Equus caballus) (33)

1a	1p1rA02	A:179-317
1b	1p1rC02	C:179-317
1c	1p1rD02	D:179-317
1d	1p1rB02	B:179-317

Architecture: Alpha-Beta Complex (3881)

Topology: Quinone Oxidoreductase; Chain A, domain 1 (131)

Homologous Superfamily: Medium-chain alcohol dehydrogenases, catalytic domain (131)

Horse (Equus caballus) (33)

2a	1p1rA01	A:1-178,A:318-374
2b	1p1rC01	C:1-178,C:318-374
2c	1p1rD01	D:1-178,D:318-374
2d	1p1rB01	B:1-178,B:318-374

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: GroES (70)

Family: ADH_N (62)

Equus caballus (Horse) (15)

1a	ADH_N-1p1rD01	D:33-160
1b	ADH_N-1p1rD02	D:33-160
1c	ADH_N-1p1rD03	D:33-160
1d	ADH_N-1p1rD04	D:33-160

Clan: NADP_Rossmann (1239)

Family: ADH_zinc_N (75)

Equus caballus (Horse) (15)

2a	ADH_zinc_N-1p1rD05	D:202-337
2b	ADH_zinc_N-1p1rD06	D:202-337
2c	ADH_zinc_N-1p1rD07	D:202-337
2d	ADH_zinc_N-1p1rD08	D:202-337

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (ADH1E_HORSE | P00327)

molecular function
	GO:0004022	alcohol dehydrogenase (NAD) activity	Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric Unit
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	Cis Peptide Bonds
		Leu A:61 - Pro A:62	[ RasMol ]
		Leu B:61 - Pro B:62	[ RasMol ]
		Leu C:61 - Pro C:62	[ RasMol ]
		Leu D:61 - Pro D:62	[ RasMol ]

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	1p1r
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	ADH1E_HORSE \| P00327
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	1.1.1.1
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	ADH1E_HORSE \| P00327
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1hld	STRUCTURE OF HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED WITH NAD+ AND SUBSTITUTED BENZYL ALCOHOLS
1lde	HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED TO NADH AND N- FORMYL PIPERDINE
1ldy	HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED TO NADH AND CYCLOHEXYL FORMAMIDE (CXF)
1n8k	HORSE LIVER ALCOHOL DEHYDROGENASE VAL292THR MUTANT COMPLEXED TO NAD+ AND PYRAZOLE
1n92	HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED WITH NAD+ AND 4-IODOPYRAZOLE
3bto	HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED TO NADH AND (1S,3S)3-BUTYLTHIOLANE 1-OXIDE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 17)

Sites (17, 17)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 4)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 8)

CATH Domains (2, 8)

Pfam Domains (2, 8)

Gene Ontology (6, 6)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File