1OSN - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF VARICELLA ZOSTER VIRUS THYMIDINE KINASE IN COMPLEX WITH BVDU-MP AND ADP

Authors :   L. E. Bird, J. Ren, A. Wright, K. D. Leslie, B. Degreve, J. Balzarini, D. K. Stammers

Date :   20 Mar 03 (Deposition) - 10 Jun 03 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.20

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: A,B,C,D  (1x)

Keywords :   Human Herpes Virus 3, Chickenpox, Thymidine Kinase, Bvdu-Mp, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   L. E. Bird, J. Ren, A. Wright, K. D. Leslie, B. Degreve, J. Balzarini, D. K. Stammers
Crystal Structure Of Varicella Zoster Virus Thymidine Kinase
J. Biol. Chem. V. 278 24680 2003
PubMed-ID: 12686543 | Reference-DOI: 10.1074/JBC.M302025200
(for further references see the PDB file header)

Molecule 1 - THYMIDINE KINASE
	Chains	:	A, B, C, D
	EC Number	:	2.7.1.21
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21
	Expression System Plasmid	:	PGEX6P1VZV-TK
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Expression System Vector Type	:	PLASMID
	Organism Common	:	VARICELLA-ZOSTER VIRUS
	Organism Scientific	:	HUMAN HERPESVIRUS 3
	Organism Taxid	:	10335
	Synonym	:	VZV-TK

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 8)

No.	Name	Count	Type	Full Name
1	ADP	4	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	BVP	4	Ligand/Ion	(E)-5-(2-BROMOVINYL)-2'-DEOXYURIDINE-5'-MONOPHOSPHATE

Biological Unit 1 (2, 4)

No.	Name	Count	Type	Full Name
1	ADP	2	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	BVP	2	Ligand/Ion	(E)-5-(2-BROMOVINYL)-2'-DEOXYURIDINE-5'-MONOPHOSPHATE

Biological Unit 2 (2, 4)

No.	Name	Count	Type	Full Name
1	ADP	2	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	BVP	2	Ligand/Ion	(E)-5-(2-BROMOVINYL)-2'-DEOXYURIDINE-5'-MONOPHOSPHATE

Biological Unit 3 (2, 8)

No.	Name	Count	Type	Full Name
1	ADP	4	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	BVP	4	Ligand/Ion	(E)-5-(2-BROMOVINYL)-2'-DEOXYURIDINE-5'-MONOPHOSPHATE

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	TYR A:21 , GLY A:22 , ILE A:23 , GLY A:24 , LYS A:25 , THR A:26 , THR A:27 , BVP A:500	BINDING SITE FOR RESIDUE ADP A 400
2	AC2	SOFTWARE	TYR A:21 , GLY A:22 , GLU A:48 , TRP A:53 , ILE A:62 , TYR A:66 , GLN A:90 , PHE A:93 , HIS A:97 , ARG A:130 , ALA A:134 , SER A:135 , PHE A:139 , ADP A:400 , HOH A:600	BINDING SITE FOR RESIDUE BVP A 500
3	AC3	SOFTWARE	TYR B:21 , GLY B:22 , ILE B:23 , GLY B:24 , LYS B:25 , THR B:26 , THR B:27 , ARG B:183 , GLN B:300 , BVP B:1500	BINDING SITE FOR RESIDUE ADP B 1400
4	AC4	SOFTWARE	TYR B:21 , GLY B:22 , GLU B:48 , TRP B:53 , ILE B:62 , TYR B:66 , GLN B:90 , PHE B:93 , HIS B:97 , ARG B:130 , ALA B:134 , SER B:135 , PHE B:139 , ADP B:1400	BINDING SITE FOR RESIDUE BVP B 1500
5	AC5	SOFTWARE	TYR C:21 , GLY C:22 , ILE C:23 , GLY C:24 , LYS C:25 , THR C:26 , THR C:27 , ARG C:183 , GLN C:300 , BVP C:2500	BINDING SITE FOR RESIDUE ADP C 2400
6	AC6	SOFTWARE	TYR C:21 , GLY C:22 , GLU C:48 , TRP C:53 , ILE C:62 , TYR C:66 , GLN C:90 , PHE C:93 , HIS C:97 , ARG C:130 , ALA C:134 , SER C:135 , PHE C:139 , ADP C:2400	BINDING SITE FOR RESIDUE BVP C 2500
7	AC7	SOFTWARE	TYR D:21 , GLY D:22 , ILE D:23 , GLY D:24 , LYS D:25 , THR D:26 , THR D:27 , ARG D:183 , GLN D:300 , BVP D:3500	BINDING SITE FOR RESIDUE ADP D 3400
8	AC8	SOFTWARE	TYR D:21 , GLY D:22 , GLU D:48 , TRP D:53 , ILE D:62 , TYR D:66 , GLN D:90 , PHE D:93 , HIS D:97 , ARG D:130 , ALA D:134 , SER D:135 , PHE D:139 , ADP D:3400	BINDING SITE FOR RESIDUE BVP D 3500

(no "SS Bond" information available for 1OSN)

(no "Cis Peptide Bond" information available for 1OSN)

(no "SAP(SNP)/Variant" information available for 1OSN)

(no "PROSITE Motif" information available for 1OSN)

(no "Exon" information available for 1OSN)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:325
 aligned with KITH_VZVO | P0C0E6 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:331
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337 
            KITH_VZVO     8 VKMGVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSRVSKRARPGETVNLPFVMVLRNVYIMLINTIIFLKTNNWHAGWNTLSFCNDVFKQKLQKSECIKLREVPGIEDTLFAVLKLPELCGEFGNILPLWAWGMETLSNCLRSMSPFVLSLEQTPQHAAQELKTLLPQMTPANMSSGAWNILKELVNAVQD 338
               SCOP domains d1osna_ A: Thymidine kinase                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 1osnA00 A:8-338 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeee......hhhhhhhhhh...hhh.eeee..hhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................eeeeee..hhhhhhhhhhhhhhh...hhhhhhhhhh.........eeeeee.hhhhhhhhh.------...hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh...hhhhhhhhh...........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhheeeeee...hhhhhhhhhhhhhhhh..eeehhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1osn A   8 VKMGVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSRVS------ETVNLPFVMVLRNVYIMLINTIIFLKTNNWHAGWNTLSFCNDVFKQKLQKSECIKLREVPGIEDTLFAVLKLPELCGEFGNILPLWAWGMETLSNCLRSMSPFVLSLEQTPQHAAQELKTLLPQMTPANMSSGAWNILKELVNAVQD 338
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       | -    |  197       207       217       227       237       247       257       267       277       287       297       307       317       327       337 
                                                                                                                                                                                                           185    192

Chain B from PDB  Type:PROTEIN  Length:315
 aligned with KITH_VZVO | P0C0E6 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:329
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329         
            KITH_VZVO    10 MGVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSRVSKRARPGETVNLPFVMVLRNVYIMLINTIIFLKTNNWHAGWNTLSFCNDVFKQKLQKSECIKLREVPGIEDTLFAVLKLPELCGEFGNILPLWAWGMETLSNCLRSMSPFVLSLEQTPQHAAQELKTLLPQMTPANMSSGAWNILKELVNAVQD 338
               SCOP domains d1osnb_ B: Thymidine kinase                                                                                                                                                                                                                                                                                                               SCOP domains
               CATH domains 1osnB00 B:10-338 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                                                                                                     CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee......hhhhhhhhhhhh.hhh.eeee..hhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....--------...eeeeee..hhhhhhhhhhhhhhh...hhhhhhhhhh.........eeeeee.hhhhhhhhh.------...hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh...hhhhhhhhhhh.........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhheeeeee...hhhhhhhhhhhhhhhh..ee.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1osn B  10 MGVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTST--------EPYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSRVS------ETVNLPFVMVLRNVYIMLINTIIFLKTNNWHAGWNTLSFCNDVFKQKLQKSECIKLREVPGIEDTLFAVLKLPELCGEFGNILPLWAWGMETLSNCLRSMSPFVLSLEQTPQHAAQELKTLLPQMTPANMSSGAWNILKELVNAVQD 338
                                    19        29        39        49        59        69        79        89        99       109  |      - |     129       139       149       159       169       179     |   -  |    199       209       219       229       239       249       259       269       279       289       299       309       319       329         
                                                                                                                                112      121                                                             185    192

Chain C from PDB  Type:PROTEIN  Length:313
 aligned with KITH_VZVO | P0C0E6 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:330
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338
            KITH_VZVO     9 KMGVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSRVSKRARPGETVNLPFVMVLRNVYIMLINTIIFLKTNNWHAGWNTLSFCNDVFKQKLQKSECIKLREVPGIEDTLFAVLKLPELCGEFGNILPLWAWGMETLSNCLRSMSPFVLSLEQTPQHAAQELKTLLPQMTPANMSSGAWNILKELVNAVQD 338
               SCOP domains d1osnc_ C: Thymidine kinase                                                                                                                                                                                                                                                                                                                SCOP domains
               CATH domains 1osnC00 C:9-338 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeee......hhhhhh.......hhh.eeee..hhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...-----------..eeeeee..hhhhhhhhhhhhhhh...hhhhhhhhhh.........eeeeee.hhhhhhhhh.------...hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh...hhhhhhhhhhh.........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhheeeeee...hhhhhhhhhhhhhhhh..eeehhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1osn C   9 KMGVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDT-----------PYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSRVS------ETVNLPFVMVLRNVYIMLINTIIFLKTNNWHAGWNTLSFCNDVFKQKLQKSECIKLREVPGIEDTLFAVLKLPELCGEFGNILPLWAWGMETLSNCLRSMSPFVLSLEQTPQHAAQELKTLLPQMTPANMSSGAWNILKELVNAVQD 338
                                    18        28        38        48        58        68        78        88        98       108 |       -   |   128       138       148       158       168       178      |  -   |   198       208       218       228       238       248       258       268       278       288       298       308       318       328       338
                                                                                                                               110         122                                                            185    192

Chain D from PDB  Type:PROTEIN  Length:315
 aligned with KITH_VZVO | P0C0E6 from UniProtKB/Swiss-Prot  Length:341

    Alignment length:331
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337 
            KITH_VZVO     8 VKMGVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSRVSKRARPGETVNLPFVMVLRNVYIMLINTIIFLKTNNWHAGWNTLSFCNDVFKQKLQKSECIKLREVPGIEDTLFAVLKLPELCGEFGNILPLWAWGMETLSNCLRSMSPFVLSLEQTPQHAAQELKTLLPQMTPANMSSGAWNILKELVNAVQD 338
               SCOP domains d1osnd_ D: Thymidine kinase                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 1osnD00 D:8-338 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                                                                                                        CATH domains
           Pfam domains (1) -----------Herpes_TK-1osnD01 D:19-299                                                                                                                                                                                                                                                               --------------------------------------- Pfam domains (1)
           Pfam domains (2) -----------Herpes_TK-1osnD02 D:19-299                                                                                                                                                                                                                                                               --------------------------------------- Pfam domains (2)
           Pfam domains (3) -----------Herpes_TK-1osnD03 D:19-299                                                                                                                                                                                                                                                               --------------------------------------- Pfam domains (3)
           Pfam domains (4) -----------Herpes_TK-1osnD04 D:19-299                                                                                                                                                                                                                                                               --------------------------------------- Pfam domains (4)
         Sec.struct. author ...eeeeeeeee......hhhhhhhhhhhh.hhh.eeee..hhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....--------...eeeeee..hhhhhhhhhhhhhhh...hhhhhhhhhh.........eeeeee.hhhhhhhhh--------..hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh...hhhhhhhhhhh.........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhheeeeee...hhhhhhhhhhhhhhhh..ee.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1osn D   8 VKMGVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTST--------EPYKIMLSDRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSRV--------TVNLPFVMVLRNVYIMLINTIIFLKTNNWHAGWNTLSFCNDVFKQKLQKSECIKLREVPGIEDTLFAVLKLPELCGEFGNILPLWAWGMETLSNCLRSMSPFVLSLEQTPQHAAQELKTLLPQMTPANMSSGAWNILKELVNAVQD 338
                                    17        27        37        47        57        67        77        87        97       107    |    -   |   127       137       147       157       167       177      |  -     | 197       207       217       227       237       247       257       267       277       287       297       307       317       327       337 
                                                                                                                                  112      121                                                            184      193

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: P-loop containing nucleoside triphosphate hydrolases (2083)

Superfamily: P-loop containing nucleoside triphosphate hydrolases (2083)

Family: Nucleotide and nucleoside kinases (231)

Protein domain: Thymidine kinase (34)

Varicella-Zoster virus [TaxId: 10335] (1)

1a	d1osna_	A:
1b	d1osnb_	B:
1c	d1osnc_	C:
1d	d1osnd_	D:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: P-loop containing nucleotide triphosphate hydrolases (1378)

Varicella-zoster virus (Human herpesvirus 3) (1)

1a	1osnC00	C:9-338
1b	1osnB00	B:10-338
1c	1osnD00	D:8-338
1d	1osnA00	A:8-338

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: P-loop_NTPase (1112)

Family: Herpes_TK (18)

Varicella-zoster virus (strain Oka vaccine) (HHV-3) (Human herpesvirus 3) (1)

1a	Herpes_TK-1osnD01	D:19-299
1b	Herpes_TK-1osnD02	D:19-299
1c	Herpes_TK-1osnD03	D:19-299
1d	Herpes_TK-1osnD04	D:19-299

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (KITH_VZVO | P0C0E6)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0004797	thymidine kinase activity	Catalysis of the reaction: ATP + thymidine = ADP + thymidine 5'-phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0071897	DNA biosynthetic process	The cellular DNA metabolic process resulting in the formation of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.
	GO:0006230	TMP biosynthetic process	The chemical reactions and pathways resulting in the formation of TMP, ribosylthymine monophosphate.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.

Asymmetric Unit
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	Cis Peptide Bonds
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 8)

Sites (8, 8)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (1, 4)

Pfam Domains (1, 4)

Gene Ontology (8, 8)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File