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(-) Description

Title :  CRYSTAL STRUCTURE OF A PUTATIVE DINITROGENASE IRON-MOLYBDENUM COFACTOR (TM1816) FROM THERMOTOGA MARITIMA AT 1.83 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  15 Oct 02  (Deposition) - 18 Dec 02  (Release) - 23 Mar 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.83
Chains :  Asym./Biol. Unit :  A
Keywords :  Ribonuclease H-Like Motif Fold, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Probable Nifb Protein That Is Involved In Femo-Co Biosynthesis Tm1816 From Thermotoga Maritima At 1. 83 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROBABLE NIFB PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: TM1816
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 2336
    Other Details: INVOLVED IN FEMO-CO BIOSYNTHESIS

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 1O13)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1O13)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1O13)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 1O13)

(-) Sequences/Alignments

Asymmetric/Biological Unit
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:107
 aligned with Q9X2D6_THEMA | Q9X2D6 from UniProtKB/TrEMBL  Length:124

    Alignment length:107
                                    10        20        30        40        50        60        70        80        90       100       
         Q9X2D6_THEMA     1 MIIAIPVSENRGKDSPISEHFGRAPYFAFVKVKNNAIADISVEENPLAQDHVHGAVPNFVKEKGAELVIVRGIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 107
               SCOP domains d1o13a_ A: Hypothetical protein TM1816                                                                      SCOP domains
               CATH domains -1o13A00 A:2-107  [code=3.30.420.130, no name defined]                                                      CATH domains
               Pfam domains ------------Nitro_FeMo-Co-1o13A01 A:13-105                                                               -- Pfam domains
         Sec.struct. author .eeeeee...hhhhh..........eeeeeeee..eeeeeeeee.hhhh.....hhhhhhhhh...eee....hhhhhhhhhhh..eee.....hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 1o13 A   1 mIIAIPVSENRGKDSPISEHFGRAPYFAFVKVKNNAIADISVEENPLAQDHVHGAVPNFVKEKGAELVIVRGIGRRAIAAFEAmGVKVIKGASGTVEEVVNQYLSGQ 107
                            |       10        20        30        40        50        60        70        80   |    90       100       
                            |                                                                                 84-MSE                   
                            1-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: Nitro_FeMo-Co] (9)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  1o13
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9X2D6_THEMA | Q9X2D6: 1t3v

(-) Related Entries Specified in the PDB File

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