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(-) Description

Title :  CRYSTAL STRUCTURE OF PHOSPHORIBOSYL ANTHRANILATE ISOMERASE FROM THERMOTOGA MARITIMA
 
Authors :  M. Hennig, J. N. J. Jansonius
Date :  13 Sep 96  (Deposition) - 12 Mar 97  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Isomerase, Phosphoribosyl Anthranilate Isomerase, Thermostability (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Hennig, R. Sterner, K. Kirschner, J. N. Jansonius
Crystal Structure At 2. 0 A Resolution Of Phosphoribosyl Anthranilate Isomerase From The Hyperthermophile Thermotoga Maritima: Possible Determinants Of Protein Stability.
Biochemistry V. 36 6009 1997
PubMed-ID: 9166771  |  Reference-DOI: 10.1021/BI962718Q
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PHOSPHORIBOSYL ANTHRANILATE ISOMERASE
    ChainsA
    EC Number5.3.1.24
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System GeneTRPF
    Expression System PlasmidPQE-60
    Expression System Taxid562
    GeneTRPF
    Organism ScientificTHERMOTOGA MARITIMA
    Organism Taxid2336
    SynonymPRAI

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1PO41Ligand/IonPHOSPHATE ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1PO42Ligand/IonPHOSPHATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:158 , GLY A:159 , VAL A:179 , SER A:180 , SER A:181 , HOH A:303 , HOH A:333 , HOH A:344BINDING SITE FOR RESIDUE PO4 A 300

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1NSJ)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Thr A:129 -Pro A:130

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1NSJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1NSJ)

(-) Exons   (0, 0)

(no "Exon" information available for 1NSJ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:205
 aligned with TRPF_THEMA | Q56320 from UniProtKB/Swiss-Prot  Length:205

    Alignment length:205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200     
           TRPF_THEMA     1 MVRVKICGITNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHGEEPIELCRKIAERILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYRDRFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEAFPGKKDHDSIKMFIKNAKGL 205
               SCOP domains d1nsja_ A: N-(5'phosphoribosyl)antranilate isomerase, PRAI                                                                                                                                                    SCOP domains
               CATH domains 1nsjA00 A:1-205 Aldolase class I                                                                                                                                                                              CATH domains
               Pfam domains ---PRAI-1nsjA01 A:4-201                                                                                                                                                                                  ---- Pfam domains
         Sec.struct. author ..eeee.....hhhhhhhhhh...eeeee..........hhhhhhhhhh.....eeeeee....hhhhhhhhhhh...eeee.....hhhhhhhhh..eeeeeeee..hhhhhhhhhh...eeeeee.............hhhhhhhhhh...eeee.......hhhhhhhh...eeee.hhh........hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1nsj A   1 MVRVKICGITNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHGEEPIELCRKIAERILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYRDRFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEAFPGKKDHDSIKMFIKNAKGL 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200     

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric Unit

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)
Chain A   (TRPF_THEMA | Q56320)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0004640    phosphoribosylanthranilate isomerase activity    Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.
biological process
    GO:0009073    aromatic amino acid family biosynthetic process    The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0000162    tryptophan biosynthetic process    The chemical reactions and pathways resulting in the formation of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; tryptophan is synthesized from chorismate via anthranilate.
    GO:0006568    tryptophan metabolic process    The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

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 Related Entries

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        TRPF_THEMA | Q563201dl3 1lbm

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