Chain A from PDB Type:PROTEIN Length:271
aligned with Q8B8X4_9ENTO | Q8B8X4 from UniProtKB/TrEMBL Length:851
Alignment length:271
590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850
Q8B8X4_9ENTO 581 RVADTVGSGPVNSESIPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESTVENFLCRSACVFYTTYKNHDSDGDNFAYWVINARQVAQLRRKLEMFTYARFDLELTFVITSTQEQSTTQGQDTPVLTHQIMYVPPGGPVPTKVNSYSWQTSTNPSVFWTEGNAPPRMSIPFIGIGNAYSMFYDGWARFDKQGTYGISTLNSMGTLYMRHVNGGGPGPIVSTVRIYFKPKHVKTWVPRPPRLCQYKKAGNVNFIPTSVTEGRTDITTMKTT 851
SCOP domains d1mqta_ A: Swine vesicular disease virus coat proteins SCOP domains
CATH domains 1mqtA00 A:13-283 [code=2.60.120.20, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..................eehhhhh.....................hhhhhhhhhhh..eeeeeeeee.........eeee.....hhhhhhhhh.eeeeeeeeeeeeeeeeee.............eeeeeee...........hhhhhh....eeeee......eeee........ee...............hhhhh....eeeeee........eeeeeeeee.eeeeeeeee.................................. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1mqt A 13 RVADTVGSGPVNSESIPALTAAETGHTSQVVPSDTMQTRHVKNYHSRSESTVENFLCRSACVFYTTYKNHDSDGDNFAYWVINARQVAQLRRKLEMFTYARFDLELTFVITSTQEQSTTQGQDTPVLTHQIMYVPPGGPVPTKVNSYSWQTSTNPSVFWTEGNAPPRMSIPFIGIGNAYSMFYDGWARFDKQGTYGISTLNSMGTLYMRHVNGGGPGPIVSTVRIYFKPKHVKTWVPRPPRLCQYKKAGNVNFIPTSVTEGRTDITTMKTT 283
22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282
Chain B from PDB Type:PROTEIN Length:254
aligned with Q8B8X4_9ENTO | Q8B8X4 from UniProtKB/TrEMBL Length:851
Alignment length:254
86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326
Q8B8X4_9ENTO 77 GYSDRVRSITLGNSTITTQECANVVVGYGVWPAYLKDEEATAEDQPTQPDVATCRFYTLESVMWQQGSPGWWWKFPDALSNMGLFGQNMQYHYLGRAGYTIHVQCNASKFHQGCLLVVCVPEAEMGCATLANKPDPKSLSKGEIASTFESQNSTGETAVQANVINAGMGVGVGNLTIFPHQWINLRTNNSATIVMPYINSVPMDNMFRHNNFTLMVIPFAPLSYSAGATTYVPITVTVAPMCAEYNGLRLAGKQ 330
SCOP domains d1mqt.1 D:,B: Swine vesicular disease virus coat proteins SCOP domains
CATH domains 1mqtB00 B:8-261 [code=2.60.120.20, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeee..eeee.......ee......................hhhhh...ee...eee......eeee.......hhhhhhhhhheeeeeeeeeeeeee......eeeeeeeee..............hhhhhh.....ee..............hhhhh....hhhhhhhh.eeeee.....eeeeee.................eeeeeeeeeee........eeeeeeeeeeeeeeeee...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1mqt B 8 GYSDRVRSITLGNSTITTQECANVVVGYGVWPAYLKDEEATAEDQPTQPDVATCRFYTLESVMWQQGSPGWWWKFPDALSNMGLFGQNMQYHYLGRAGYTIHVQCNASKFHQGCLLVVCVPEAEMGCATLANKPDPKSLSKGEIASTFESQNSTGETAVQANVINAGMGVGVGNLTIFPHQWINLRTNNSATIVMPYINSVPMDNMFRHNNFTLMVIPFAPLSYSAGATTYVPITVTVAPMCAEYNGLRLAGKQ 261
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257
Chain C from PDB Type:PROTEIN Length:238
aligned with Q8B8X4_9ENTO | Q8B8X4 from UniProtKB/TrEMBL Length:851
Alignment length:238
340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560
Q8B8X4_9ENTO 331 GLPTLATPGSNQFLTSDDFQSPSAMPQFDVTPEMDIPGQVNNLMEIAEVDSVVPVNNTEGKEMSIEAYQIPVQSNPTNGSQVFGFPLTPGASSVLNRTLLGEILNYYAHWSGSIKLTFMFCGSAMATGKFLLAYSPPGAGAPTTRKEAMLGTHVIWDVGLQSSCVLCIPWISQTHYRYVVMDEYTAGGYITCWYQTNIVVPADAQSDCKILCFVSACNDFSVRMLKDTPFIKQDNFFQ 568
SCOP domains d1mqtc_ C: Swine vesicular disease virus coat proteins SCOP domains
CATH domains 1mqtC00 C:1-238 [code=2.60.120.20, no name defined] CATH domains
Pfam domains (1) ---------------------------Rhv-1mqtC01 C:28-198 ---------------------------------------- Pfam domains (1)
Pfam domains (2) ---------------------------Rhv-1mqtC02 C:28-198 ---------------------------------------- Pfam domains (2)
Pfam domains (3) ---------------------------Rhv-1mqtC03 C:28-198 ---------------------------------------- Pfam domains (3)
Sec.struct. author ......................................ee..hhhhhh...........hhhhhhhhhheee........eeeeee...........hhhhhhhh.eeeee..eeeeeee......eeeeeeeee........hhhhhh..eeeeee.....eeeeee........ee...hhhhh..eeeeeeeeeee........eeeeeeeee....eeeee............. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1mqt C 1 GLPTLATPGSNQFLTSDDFQSPSAMPQFDVTPEMDIPGQVNNLMEIAEVDSVVPVNNTEGKEMSIEAYQIPVQSNPTNGSQVFGFPLTPGASSVLNRTLLGEILNYYAHWSGSIKLTFMFCGSAMATGKFLLAYSPPGAGAPTTRKEAMLGTHVIWDVGLQSSCVLCIPWISQTHYRYVVMDEYTAGGYITCWYQTNIVVPADAQSDCKILCFVSACNDFSVRMLKDTPFIKQDNFFQ 238
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230
Chain D from PDB Type:PROTEIN Length:55
aligned with Q8B8X4_9ENTO | Q8B8X4 from UniProtKB/TrEMBL Length:851
Alignment length:68
11 21 31 41 51 61
Q8B8X4_9ENTO 2 GAQVSTQKTGAHETSLNAAGNSVIHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDIMVKSMPALN 69
SCOP domains d1mqt.1 D: ,B: Swine vesicular disease virus coat protei SCOP domains
CATH domains 1mqtD00 D: 2-69 Rhinovirus 14, subunit 4 CATH domains
Pfam domains Pico_P1A-1 mqtD01 D:2-69 Pfam domains
Sec.struct. author ..eeee....-------------.eeee.....hhhhh.............................. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------- Transcript
1mqt D 2 GAQVSTQKTG-------------IHYTNINYYKDAASNSANRQDFTQDPGKFTEPVKDIMVKSMPALN 69
11 - | 31 41 51 61
11 25
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |