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Description

Title :   NMR STRUCTURE OF PW2 BOUND TO SDS MICELLES: A TRYPTOPHAN-RICH ANTICOCIDIAL PEPTIDE SELECTED FROM PHAGE DISPLAY LIBRARIES

Authors :   L. W. Tinoco, A. Da Silva Jr. , A. Leite, A. P. Valente, F. C. Almeida

Date :   11 Jun 02 (Deposition) - 14 Aug 02 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A  (19x)

Keywords :   Anticoccidial Peptide, Eimeria, Sds, Micelle, Antimicrobial, Pw2, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   L. W. Tinoco, A. Da Silva Jr. , A. Leite, A. P. Valente, F. C. Almeida
Nmr Structure Of Pw2 Bound To Sds Micelles. A Tryptophan-Rich Anticoccidial Peptide Selected From Phage Display Libraries
J. Biol. Chem. V. 277 36351 2002
PubMed-ID: 12130641 | Reference-DOI: 10.1074/JBC.M204225200
(for further references see the PDB file header)

Compounds

Molecule 1 - HIS-PRO-LEU-LYS-GLN-TYR-TRP-TRP-ARG-PRO-SER-ILE
	Chains	:	A
	Engineered	:	YES
	Other Details	:	SOLID PHASE SYNTHESIS
	Synonym	:	PW2
	Synthetic	:	YES

Structural Features

Chains, Units


NMR Structure (19x)	:

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1M02)

Sites (0, 0)

(no "Site" information available for 1M02)

SS Bonds (0, 0)

(no "SS Bond" information available for 1M02)

Cis Peptide Bonds (0, 0)

(no "Cis Peptide Bond" information available for 1M02)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

(no "SAP(SNP)/Variant" information available for 1M02)

PROSITE Motifs (0, 0)

(no "PROSITE Motif" information available for 1M02)

Exons (0, 0)

(no "Exon" information available for 1M02)

Sequences/Alignments

NMR Structure

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:12
                                           
               SCOP domains d1m02a_ A:   SCOP domains
               CATH domains ------------ CATH domains
               Pfam domains ------------ Pfam domains
         Sec.struct. author ............ Sec.struct. author
                 SAPs(SNPs) ------------ SAPs(SNPs)
                    PROSITE ------------ PROSITE
                 Transcript ------------ Transcript
                  1m02 A  1 HPLKQYWWRPSI 12
                                    10

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

NMR Structure

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

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Organisms( (-)

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Class: Designed proteins (167)

Fold: PW2, a tryptophan-rich anticocidial peptide (1)

Superfamily: PW2, a tryptophan-rich anticocidial peptide (1)

Family: PW2, a tryptophan-rich anticocidial peptide (1)

Protein domain: PW2, a tryptophan-rich anticocidial peptide (1)

Synthetic (1)

d1m02a_

CATH Domains (0, 0)

(no "CATH Domain" information available for 1M02)

Pfam Domains (0, 0)

(no "Pfam Domain" information available for 1M02)

Gene Ontology (0, 0)

NMR Structure(hide GO term definitions)

(no "Gene Ontology" information available for 1M02)

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	Ligands, Modified Residues, Ions
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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

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Related Entries Specified in the PDB File

1d6x	TRITRPTICIN BOUND TO MICELLES-A DISTINCT MEMBRANE-BOUND PEPTIDE FOLD
1g89	INDOLICIDIN BOUND TO DODECYLPHOSPHOCHOLINE MICELLES
1g8c	INDOLICIDIN BOUND TO SODIUM DODECYL SULFATE MICELLES
1hr1	INDOLICIDIN PEPTIDE DERIVATIVE WITH P-->A SUBSTITUTION