1LL4 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   STRUCTURE OF C. IMMITIS CHITINASE 1 COMPLEXED WITH ALLOSAMIDIN

Authors :   K. Bortone, A. F. Monzingo, S. Ernst, J. D. Robertus

Date :   26 Apr 02 (Deposition) - 25 Sep 02 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.80

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)

Keywords :   Beta-Alpha Barrel, Enzyme-Inhibitor Complex, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. Bortone, A. F. Monzingo, S. Ernst, J. D. Robertus
The Structure Of An Allosamidin Complex With The Coccidioides Immitis Chitinase Defines A Role For A Second Acid Residue In Substrate-Assisted Mechanism
J. Mol. Biol. V. 320 293 2002
PubMed-ID: 12079386 | Reference-DOI: 10.1016/S0022-2836(02)00444-8
(for further references see the PDB file header)

Molecule 1 - CHITINASE 1
	Chains	:	A, B, C, D
	EC Number	:	3.2.1.14
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PGEX-4T-3
	Expression System Taxid	:	562
	Fragment	:	RESIDUES 36-427
	Gene	:	CTS1
	Organism Scientific	:	COCCIDIOIDES IMMITIS
	Organism Taxid	:	5501

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 12)

No.	Name	Count	Type	Full Name
1	AMI	4	Ligand/Ion	ALLOSAMIZOLINE
2	NAA	8	Ligand/Ion	N-ACETYL-D-ALLOSAMINE

Biological Unit 1 (2, 3)

No.	Name	Count	Type	Full Name
1	AMI	1	Ligand/Ion	ALLOSAMIZOLINE
2	NAA	2	Ligand/Ion	N-ACETYL-D-ALLOSAMINE

Biological Unit 2 (2, 3)

No.	Name	Count	Type	Full Name
1	AMI	1	Ligand/Ion	ALLOSAMIZOLINE
2	NAA	2	Ligand/Ion	N-ACETYL-D-ALLOSAMINE

Biological Unit 3 (2, 3)

No.	Name	Count	Type	Full Name
1	AMI	1	Ligand/Ion	ALLOSAMIZOLINE
2	NAA	2	Ligand/Ion	N-ACETYL-D-ALLOSAMINE

Biological Unit 4 (2, 3)

No.	Name	Count	Type	Full Name
1	AMI	1	Ligand/Ion	ALLOSAMIZOLINE
2	NAA	2	Ligand/Ion	N-ACETYL-D-ALLOSAMINE

Asymmetric Unit (12, 12)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	TRP A:47 , ARG A:52 , THR A:132 , TYR A:133 , GLU A:316 , NAA A:502	BINDING SITE FOR RESIDUE NAA A 501
02	AC2	SOFTWARE	TRP A:47 , GLY A:130 , TRP A:131 , THR A:132 , GLU A:316 , TRP A:378 , NAA A:501 , AMI A:503 , HOH A:1029	BINDING SITE FOR RESIDUE NAA A 502
03	AC3	SOFTWARE	TRP B:47 , ARG B:52 , THR B:132 , TYR B:133 , GLU B:316 , NAA B:502	BINDING SITE FOR RESIDUE NAA B 501
04	AC4	SOFTWARE	TRP B:47 , GLY B:130 , TRP B:131 , THR B:132 , GLU B:316 , TRP B:378 , NAA B:501 , AMI B:503	BINDING SITE FOR RESIDUE NAA B 502
05	AC5	SOFTWARE	TRP C:47 , THR C:132 , TYR C:133 , GLU C:316 , NAA C:502	BINDING SITE FOR RESIDUE NAA C 501
06	AC6	SOFTWARE	TRP C:47 , GLY C:130 , TRP C:131 , THR C:132 , GLU C:316 , TRP C:378 , NAA C:501 , AMI C:503	BINDING SITE FOR RESIDUE NAA C 502
07	AC7	SOFTWARE	TRP D:47 , ARG D:52 , THR D:132 , GLU D:316 , NAA D:502	BINDING SITE FOR RESIDUE NAA D 501
08	AC8	SOFTWARE	TRP D:47 , GLY D:130 , TRP D:131 , THR D:132 , GLU D:316 , TRP D:378 , NAA D:501 , AMI D:503	BINDING SITE FOR RESIDUE NAA D 502
09	AC9	SOFTWARE	TYR A:43 , PHE A:71 , TRP A:131 , ASP A:169 , GLU A:171 , MET A:237 , TYR A:239 , ASP A:240 , TYR A:293 , TRP A:378 , NAA A:502	BINDING SITE FOR RESIDUE AMI A 503
10	BC1	SOFTWARE	TYR B:43 , PHE B:71 , TRP B:131 , ASP B:169 , GLU B:171 , MET B:237 , TYR B:239 , ASP B:240 , TYR B:293 , MET B:376 , TRP B:378 , NAA B:502	BINDING SITE FOR RESIDUE AMI B 503
11	BC2	SOFTWARE	TYR C:43 , PHE C:71 , GLY C:130 , TRP C:131 , ASP C:169 , GLU C:171 , MET C:237 , TYR C:239 , ASP C:240 , TYR C:293 , TRP C:378 , NAA C:502 , HOH C:1079	BINDING SITE FOR RESIDUE AMI C 503
12	BC3	SOFTWARE	TYR D:43 , PHE D:71 , TRP D:131 , ASP D:169 , GLU D:171 , MET D:237 , TYR D:239 , ASP D:240 , TYR D:293 , MET D:376 , TRP D:378 , NAA D:502	BINDING SITE FOR RESIDUE AMI D 503

(no "SS Bond" information available for 1LL4)

Asymmetric Unit

No.	Residues
1	Ala A:70	-	Phe A:71
2	Glu A:171	-	Tyr A:172
3	Met A:325	-	Pro A:326
4	Trp A:378	-	Glu A:379
5	Ala B:70	-	Phe B:71
6	Glu B:171	-	Tyr B:172
7	Met B:325	-	Pro B:326
8	Trp B:378	-	Glu B:379
9	Ala C:70	-	Phe C:71
10	Glu C:171	-	Tyr C:172
11	Met C:325	-	Pro C:326
12	Trp C:378	-	Glu C:379
13	Ala D:70	-	Phe D:71
14	Glu D:171	-	Tyr D:172
15	Met D:325	-	Pro D:326
16	Trp D:378	-	Glu D:379

Asymmetric Unit (2, 8)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_CHI1_COCPS_003 *	N	103	K	CHI1_COCPS	---	---	A/B/C/D	N	103	K
2	UniProt	VAR_CHI1_COCPS_004 *	I	109	T	CHI1_COCPS	---	---	A/B/C/D	I	109	T
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_CHI1_COCPS_003 *	N	103	K	CHI1_COCPS	---	---	A	N	103	K
2	UniProt	VAR_CHI1_COCPS_004 *	I	109	T	CHI1_COCPS	---	---	A	I	109	T
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_CHI1_COCPS_003 *	N	103	K	CHI1_COCPS	---	---	B	N	103	K
2	UniProt	VAR_CHI1_COCPS_004 *	I	109	T	CHI1_COCPS	---	---	B	I	109	T
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_CHI1_COCPS_003 *	N	103	K	CHI1_COCPS	---	---	C	N	103	K
2	UniProt	VAR_CHI1_COCPS_004 *	I	109	T	CHI1_COCPS	---	---	C	I	109	T
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 4 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_CHI1_COCPS_003 *	N	103	K	CHI1_COCPS	---	---	D	N	103	K
2	UniProt	VAR_CHI1_COCPS_004 *	I	109	T	CHI1_COCPS	---	---	D	I	109	T
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHITINASE_18	PS01095	Chitinases family 18 active site.	CHI1_COCPS	163-171	4	A:163-171 B:163-171 C:163-171 D:163-171

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHITINASE_18	PS01095	Chitinases family 18 active site.	CHI1_COCPS	163-171	1	A:163-171 - - -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHITINASE_18	PS01095	Chitinases family 18 active site.	CHI1_COCPS	163-171	1	- B:163-171 - -

Biological Unit 3 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHITINASE_18	PS01095	Chitinases family 18 active site.	CHI1_COCPS	163-171	1	- - C:163-171 -

Biological Unit 4 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CHITINASE_18	PS01095	Chitinases family 18 active site.	CHI1_COCPS	163-171	1	- - - D:163-171

(no "Exon" information available for 1LL4)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:392
 aligned with CHI1_COCPS | P0CB51 from UniProtKB/Swiss-Prot  Length:427

    Alignment length:392
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425  
           CHI1_COCPS    36 GGFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGGGSWENGVWDYKDMPQQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGLGGTGKLEQRENELSYPESVYDNLKNGMPS 427
               SCOP domains d1ll4a1 A:36-292,A:355-427 Chitinase 1                                                                                                                                                                                                                           d1ll4a2 A:293-354 Chitinase 1                                 d1ll4a1 A:36-292,A:355-427 Chitinase 1                                    SCOP domains
               CATH domains 1ll4A01 A:36-291,A:355-427 Glycosidases                                                                                                                                                                                                                         1ll4A02 A:292-354  [code=3.10.50.10, no name defined]          1ll4A01 A:36-291,A:355-427 Glycosidases                                   CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee.hhhh....hhhhhhhhhh.eeeeeeeee.....eee.hhhhhhh...............hhhhhhhhhhhhhh...eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeee.hhhhhh..hhhhhhh...eeeee.......................hhhhh..hhhhhhhhhhhhh.hhh.eeeeee.eeeee.....................eee.hhh.....eeeeehhhheeeeee....eeee..hhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhhhh.............hhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------K-----T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------CHITINASE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ll4 A  36 GGFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGGGSWENGVWDYKDMPQQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGLGGTGKLEQRENELSYPESVYDNLKNGMPS 427
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425

Chain B from PDB  Type:PROTEIN  Length:392
 aligned with CHI1_COCPS | P0CB51 from UniProtKB/Swiss-Prot  Length:427

    Alignment length:392
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425  
           CHI1_COCPS    36 GGFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGGGSWENGVWDYKDMPQQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGLGGTGKLEQRENELSYPESVYDNLKNGMPS 427
               SCOP domains d1ll4b1 B:36-292,B:355-427 Chitinase 1                                                                                                                                                                                                                           d1ll4b2 B:293-354 Chitinase 1                                 d1ll4b1 B:36-292,B:355-427 Chitinase 1                                    SCOP domains
               CATH domains 1ll4B01 B:36-291,B:355-427 Glycosidases                                                                                                                                                                                                                         1ll4B02 B:292-354  [code=3.10.50.10, no name defined]          1ll4B01 B:36-291,B:355-427 Glycosidases                                   CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee.hhhh....hhhhhhhhhh.eeeeeeeee.....eee.hhhhhhh...............hhhhhhhhhhhhhh...eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeee.hhhhhh..hhhhhhh...eeeee.......................hhhhh..hhhhhhhhhhhhh.hhh.eeeeee.eeeee.....................eee.hhh.....eeeeehhhheeeeee....eeee..hhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhhhh.............hhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------K-----T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------CHITINASE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ll4 B  36 GGFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGGGSWENGVWDYKDMPQQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGLGGTGKLEQRENELSYPESVYDNLKNGMPS 427
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425

Chain C from PDB  Type:PROTEIN  Length:392
 aligned with CHI1_COCPS | P0CB51 from UniProtKB/Swiss-Prot  Length:427

    Alignment length:392
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425  
           CHI1_COCPS    36 GGFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGGGSWENGVWDYKDMPQQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGLGGTGKLEQRENELSYPESVYDNLKNGMPS 427
               SCOP domains d1ll4c1 C:36-292,C:355-427 Chitinase 1                                                                                                                                                                                                                           d1ll4c2 C:293-354 Chitinase 1                                 d1ll4c1 C:36-292,C:355-427 Chitinase 1                                    SCOP domains
               CATH domains 1ll4C01 C:36-291,C:355-427 Glycosidases                                                                                                                                                                                                                         1ll4C02 C:292-354  [code=3.10.50.10, no name defined]          1ll4C01 C:36-291,C:355-427 Glycosidases                                   CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee.hhhh....hhhhhhhhhh.eeeeeeeee.....eee.hhhhhhh...............hhhhhhhhhhhhhh...eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeee.hhhhhh..hhhhhhh...eeeee.......................hhhhh..hhhhhhhhhhhhh.hhh.eeeeee.eeeee.....................eee.hhh.....eeeeehhhheeeeee....eeee..hhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhhhh.............hhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------K-----T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------CHITINASE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ll4 C  36 GGFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGGGSWENGVWDYKDMPQQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGLGGTGKLEQRENELSYPESVYDNLKNGMPS 427
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425

Chain D from PDB  Type:PROTEIN  Length:392
 aligned with CHI1_COCPS | P0CB51 from UniProtKB/Swiss-Prot  Length:427

    Alignment length:392
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425  
           CHI1_COCPS    36 GGFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGGGSWENGVWDYKDMPQQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGLGGTGKLEQRENELSYPESVYDNLKNGMPS 427
               SCOP domains d1ll4d1 D:36-292,D:355-427 Chitinase 1                                                                                                                                                                                                                           d1ll4d2 D:293-354 Chitinase 1                                 d1ll4d1 D:36-292,D:355-427 Chitinase 1                                    SCOP domains
               CATH domains 1ll4D01 D:36-291,D:355-427 Glycosidases                                                                                                                                                                                                                         1ll4D02 D:292-354  [code=3.10.50.10, no name defined]          1ll4D01 D:36-291,D:355-427 Glycosidases                                   CATH domains
           Pfam domains (1) --Glyco_hydro_18-1ll4D01 D:38-383                                                                                                                                                                                                                                                                                                                           -------------------------------------------- Pfam domains (1)
           Pfam domains (2) --Glyco_hydro_18-1ll4D02 D:38-383                                                                                                                                                                                                                                                                                                                           -------------------------------------------- Pfam domains (2)
           Pfam domains (3) --Glyco_hydro_18-1ll4D03 D:38-383                                                                                                                                                                                                                                                                                                                           -------------------------------------------- Pfam domains (3)
           Pfam domains (4) --Glyco_hydro_18-1ll4D04 D:38-383                                                                                                                                                                                                                                                                                                                           -------------------------------------------- Pfam domains (4)
         Sec.struct. author ...eeeeeee.hhhh....hhhhhhhhhh.eeeeeeeee.....eee.hhhhhhh...............hhhhhhhhhhhhhh...eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeee.hhhhhh..hhhhhhh...eeeee.......................hhhhh..hhhhhhhhhhhhh.hhh.eeeeee...............................hhh..........hhhh................hhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhhhh.............hhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------K-----T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------CHITINASE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ll4 D  36 GGFRSVVYFVNWAIYGRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQNYNKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGGGSWENGVWDYKDMPQQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGLGGTGKLEQRENELSYPESVYDNLKNGMPS 427
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

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Superfamilies( (-)

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Families(

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Protein Domains( (-)

)

Organisms( (-)

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Class: Alpha and beta proteins (a+b) (23004)

Fold: FKBP-like (309)

Superfamily: Chitinase insertion domain (107)

Family: Chitinase insertion domain (107)

Protein domain: Chitinase 1 (18)

Fungus (Coccidioides immitis) [TaxId: 5501] (4)

1a	d1ll4a2	A:293-354
1b	d1ll4d2	D:293-354
1c	d1ll4b2	B:293-354
1d	d1ll4c2	C:293-354

Class: Alpha and beta proteins (a/b) (23833)

Fold: TIM beta/alpha-barrel (3956)

Superfamily: (Trans)glycosidases (1191)

Family: Type II chitinase (131)

Protein domain: Chitinase 1 (18)

Fungus (Coccidioides immitis) [TaxId: 5501] (4)

2a	d1ll4a1	A:36-292,A:355-427
2b	d1ll4d1	D:36-292,D:355-427
2c	d1ll4b1	B:36-292,B:355-427
2d	d1ll4c1	C:36-292,C:355-427

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

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Homologous Superfamilies( (-)

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Organisms( (-)

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Class: Alpha Beta (26913)

Architecture: Alpha-Beta Barrel (2994)

Topology: TIM Barrel (2806)

Homologous Superfamily: Glycosidases (843)

Coccidioides immitis. Organism_taxid: 5501. (3)

1a	1ll4A01	A:36-291,A:355-427
1b	1ll4B01	B:36-291,B:355-427
1c	1ll4C01	C:36-291,C:355-427
1d	1ll4D01	D:36-291,D:355-427

Architecture: Roll (3276)

Topology: Chitinase A; domain 3 (225)

Homologous Superfamily: [code=3.10.50.10, no name defined] (121)

Coccidioides immitis. Organism_taxid: 5501. (3)

2a	1ll4A02	A:292-354
2b	1ll4B02	B:292-354
2c	1ll4C02	C:292-354
2d	1ll4D02	D:292-354

Asymmetric Unit

Clans(

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Families(

)

Organisms( (-)

)

Clan: Glyco_hydro_tim (488)

Family: Glyco_hydro_18 (72)

Coccidioides posadasii (strain RMSCC 757 / Silveira) (Valley fever fungus) (3)

1a	Glyco_hydro_18-1ll4D01	D:38-383
1b	Glyco_hydro_18-1ll4D02	D:38-383
1c	Glyco_hydro_18-1ll4D03	D:38-383
1d	Glyco_hydro_18-1ll4D04	D:38-383

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (CHI1_COCPS | P0CB51)

molecular function
	GO:0008061	chitin binding	Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
	GO:0004568	chitinase activity	Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0016798	hydrolase activity, acting on glycosyl bonds	Catalysis of the hydrolysis of any glycosyl bond.
	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Catalysis of the hydrolysis of any O-glycosyl bond.
biological process
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0006032	chitin catabolic process	The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0000272	polysaccharide catabolic process	The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

Asymmetric Unit
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	Cis Peptide Bonds
		Ala A:70 - Phe A:71	[ RasMol ]
		Ala B:70 - Phe B:71	[ RasMol ]
		Ala C:70 - Phe C:71	[ RasMol ]
		Ala D:70 - Phe D:71	[ RasMol ]
		Glu A:171 - Tyr A:172	[ RasMol ]
		Glu B:171 - Tyr B:172	[ RasMol ]
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		Glu D:171 - Tyr D:172	[ RasMol ]
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		Trp B:378 - Glu B:379	[ RasMol ]
		Trp C:378 - Glu C:379	[ RasMol ]
		Trp D:378 - Glu D:379	[ RasMol ]

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	1ll4
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	3.2.1.14
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UniProtKB/Swiss-Prot
	CHI1_COCPS \| P0CB51	:	1d2k 1ll6 1ll7

1d2k	C. IMMITIS CHITINASE 1 AT 2.2 ANGSTROMS RESOLUTION
1ll6	STRUCTURE OF THE D169N MUTANT OF C. IMMITIS CHITINASE 1
1ll7	STRUCTURE OF THE E171Q MUTANT OF C. IMMITIS CHITINASE 1

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 12)

Sites (12, 12)

SS Bonds (0, 0)

Cis Peptide Bonds (16, 16)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (2, 8)

PROSITE Motifs (1, 4)

Exons (0, 0)

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SCOP Domains (2, 8)

CATH Domains (2, 8)

Pfam Domains (1, 4)

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