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(-) Description

Title :  STRUCTURE GENOMICS, PROTEIN TM1056, CUTA
 
Authors :  A. Savchenko, R. Zhang, A. Joachimiak, A. Edwards, T. Akarina, Midwest For Structural Genomics (Mcsg)
Date :  08 Jan 02  (Deposition) - 14 Aug 02  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Cuta, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Savchenko, T. Skarina, E. Evdokimova, J. D. Watson, R. Laskowski, C. H. Arrowsmith, A. M. Edwards, A. Joachimiak, R. G. Zhang
X-Ray Crystal Structure Of Cuta From Thermotoga Maritima At 1. 4 A Resolution.
Proteins V. 54 162 2004
PubMed-ID: 14705033  |  Reference-DOI: 10.1002/PROT.10585

(-) Compounds

Molecule 1 - PROTEIN TM1056, CUTA
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: MODIFIED PET15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 2336

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 9)
No.NameCountTypeFull Name
1MSE9Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 1KR4)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1KR4)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1KR4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1KR4)

(-) Exons   (0, 0)

(no "Exon" information available for 1KR4)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:110
 aligned with CUTA_THEMA | Q9X0E6 from UniProtKB/Swiss-Prot  Length:101

    Alignment length:110
                                   1                                                                                                 101  
                                   | 3        13        23        33        43        53        63        73        83        93       | -
           CUTA_THEMA     - -------MILVYSTFPNEEKALEIGRKLLEKRLIACFNAFEIRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETPAIFTLKVENVLTEYMNWLRESVL--   -
               SCOP domains d1kr4a_ A: Hypothetical protein TM1056                                                                         SCOP domains
               CATH domains 1kr4A00 A:0-109  [code=3.30.70.830, no name defined]                                                           CATH domains
               Pfam domains -------CutA1-1kr4A01 A:7-107                                                                                -- Pfam domains
         Sec.struct. author ..ee...eeeeeeee.hhhhhhhhhhhhhhh....eeeeeeeeeeeee..eeeeeeeeeeeeeee..hhhhhhhhhhhhh......eeee....eehhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------- Transcript
                 1kr4 A   0 ALYFmGHmILVYSTFPNEEKALEIGRKLLEKRLIACFNAFEIRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETPAIFTLKVENILTEYmNWLRESVLGS 109
                                |  | 9        19        29        39        49        59        69        79        89        99       109
                                |  |                                                                                          99-MSE      
                                4-MSE                                                                                                     
                                   7-MSE
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: GlnB-like (50)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A   (CUTA_THEMA | Q9X0E6)
molecular function
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
biological process
    GO:0010038    response to metal ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  1kr4
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CUTA_THEMA | Q9X0E6: 1o5j 1vhf

(-) Related Entries Specified in the PDB File

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